Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 AC073046.2-201ENST00000604756 527 ntBASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 AC018690.1-201ENST00000608144 626 ntBASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 AL445493.3-201ENST00000619568 477 ntBASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 AC007275.1-201ENST00000621243 671 ntBASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 AP000943.4-201ENST00000622912 357 ntBASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 AP001052.1-201ENST00000626421 99 ntBASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 PARP4P1-201ENST00000435945 2337 ntBASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 NEK2P2-201ENST00000438441 1338 ntBASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 AC233968.1-201ENST00000611212 1300 ntBASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 Z98755.1-201ENST00000407015 1384 ntBASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDK5RAP1Q96SZ6 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 RPS2P45-201ENST00000469997 2057 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AL136984.1-201ENST00000607611 1893 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 RN7SKP171-201ENST00000364417 303 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 RNU6-891P-201ENST00000384280 111 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 Y_RNA.505-201ENST00000384489 102 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AC022028.1-201ENST00000412054 408 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 OR51B3P-201ENST00000412287 913 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 DHFRP2-201ENST00000414224 547 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 NPM1P48-201ENST00000436002 853 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 PMS2P9-201ENST00000441237 515 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 VN1R40P-201ENST00000455196 941 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AC116562.1-201ENST00000485355 781 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 RN7SL714P-201ENST00000487050 298 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 WDR78-207ENST00000488333 613 ntTSL 3 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 RBBP4P1-201ENST00000502424 1276 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 LAMTOR3P2-201ENST00000504479 232 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AC010343.2-201ENST00000510162 224 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 RN7SKP70-201ENST00000516655 271 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AC104115.2-201ENST00000523026 687 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 IGHV1-14-201ENST00000523391 241 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AC084337.1-201ENST00000524809 686 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AC002519.2-203ENST00000567043 837 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 MIR4271-201ENST00000582451 67 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AC010620.1-201ENST00000601088 1102 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 SMIM12P1-201ENST00000603004 274 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 DOCK11P1-201ENST00000553480 5932 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms