Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 AC109780.1-201ENST00000451768 1344 ntBASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 HMGB1P32-201ENST00000425971 565 ntBASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 AC010343.2-201ENST00000510162 224 ntBASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 MIR4776-2-201ENST00000580204 80 ntBASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 AC104785.1-201ENST00000603220 588 ntBASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 AC012653.2-201ENST00000621880 420 ntBASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 AP002833.3-201ENST00000625075 2265 ntBASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 AC096921.2-201ENST00000561507 1916 ntBASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RP1L1Q8IWN7 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 SNORA11-201ENST00000408789 128 ntBASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 RPL37P18-201ENST00000411602 243 ntBASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 OR7E116P-201ENST00000448529 957 ntBASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 HIGD1AP8-201ENST00000453927 274 ntBASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 RPL35AP28-201ENST00000459730 331 ntBASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 AC109481.1-201ENST00000509173 282 ntBASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 AF230666.2-201ENST00000602328 725 ntBASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 RNF138P2-201ENST00000603490 592 ntBASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 RN7SL544P-201ENST00000617232 284 ntBASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 RN7SL763P-201ENST00000620922 284 ntBASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 AC011369.2-201ENST00000624423 1567 ntBASIC5.34□□□□□ -1.55
RP1L1Q8IWN7 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 GAPDHP24-201ENST00000328713 983 ntBASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 AL109941.1-201ENST00000401925 229 ntBASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 OR2W4P-201ENST00000406496 926 ntBASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 Y_RNA.625-201ENST00000411256 107 ntBASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 OR6E1P-201ENST00000414424 923 ntBASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 CFL1P1-202ENST00000432948 411 ntBASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 RPL12P3-201ENST00000440080 396 ntBASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 AC090510.2-201ENST00000617465 629 ntBASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 AC116631.1-202ENST00000640984 683 ntBASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RP1L1Q8IWN7 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RP1L1Q8IWN7 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RP1L1Q8IWN7 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.33□□□□□ -1.56
RP1L1Q8IWN7 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RP1L1Q8IWN7 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
RP1L1Q8IWN7 GNL2P1-201ENST00000451274 2190 ntBASIC5.33□□□□□ -1.56
RP1L1Q8IWN7 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.33□□□□□ -1.56
RP1L1Q8IWN7 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.33□□□□□ -1.56
RP1L1Q8IWN7 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RP1L1Q8IWN7 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RP1L1Q8IWN7 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RP1L1Q8IWN7 BX322650.1-201ENST00000332359 2143 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms