Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 AC105399.1-202ENST00000447303 205 ntBASIC4.53□□□□□ -1.68
VPS13CQ709C8 RN7SL604P-201ENST00000492589 296 ntBASIC4.53□□□□□ -1.68
VPS13CQ709C8 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 AC007346.2-201ENST00000564816 892 ntBASIC4.53□□□□□ -1.68
VPS13CQ709C8 AC091042.1-201ENST00000579213 173 ntBASIC4.53□□□□□ -1.68
VPS13CQ709C8 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS13CQ709C8 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS13CQ709C8 CDY5P-201ENST00000411487 1580 ntBASIC4.53□□□□□ -1.68
VPS13CQ709C8 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 CDY9P-201ENST00000451397 1580 ntBASIC4.53□□□□□ -1.68
VPS13CQ709C8 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS13CQ709C8 TOGARAM1-201ENST00000361462 6375 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS13CQ709C8 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS13CQ709C8 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS13CQ709C8 RNU1-149P-201ENST00000390870 161 ntBASIC4.53□□□□□ -1.68
VPS13CQ709C8 AC013442.1-201ENST00000397347 228 ntBASIC4.53□□□□□ -1.68
VPS13CQ709C8 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS13CQ709C8 AC234779.1-201ENST00000425910 285 ntBASIC4.53□□□□□ -1.68
VPS13CQ709C8 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 AC012512.1-201ENST00000446594 718 ntBASIC4.53□□□□□ -1.68
VPS13CQ709C8 RN7SL41P-201ENST00000476144 297 ntBASIC4.53□□□□□ -1.68
VPS13CQ709C8 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 AP002373.2-201ENST00000541631 1060 ntBASIC4.53□□□□□ -1.68
VPS13CQ709C8 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 CTSC-203ENST00000524463 6125 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS13CQ709C8 PRDM15-203ENST00000422911 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS13CQ709C8 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS13CQ709C8 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS13CQ709C8 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS13CQ709C8 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 PLCXD2-205ENST00000636933 7710 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 ST3GAL1-207ENST00000521180 6951 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS13CQ709C8 MALAT1-202ENST00000534336 8708 ntBASIC4.53□□□□□ -1.68
VPS13CQ709C8 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS13CQ709C8 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 TMA16P2-201ENST00000413187 601 ntBASIC4.53□□□□□ -1.68
VPS13CQ709C8 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 AC068790.4-201ENST00000602474 263 ntBASIC4.53□□□□□ -1.68
VPS13CQ709C8 AC004890.3-201ENST00000605566 1095 ntBASIC4.53□□□□□ -1.68
VPS13CQ709C8 AL445647.2-201ENST00000615170 130 ntBASIC4.53□□□□□ -1.68
VPS13CQ709C8 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS13CQ709C8 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
VPS13CQ709C8 RP1-201ENST00000220676 7100 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
VPS13CQ709C8 ITGA11-202ENST00000423218 10192 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 VIL1-201ENST00000248444 6531 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS13CQ709C8 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 MIR133B-201ENST00000362210 119 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 RPSAP35-201ENST00000413753 818 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 AC004690.1-201ENST00000418216 328 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VPS13CQ709C8 RHOT1P3-201ENST00000436571 331 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 RN7SKP147-201ENST00000517154 244 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 C1GALT1P3-201ENST00000522049 819 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 AC011453.2-201ENST00000603737 729 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS13CQ709C8 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 CNTN4-205ENST00000427331 4980 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 NCOA4P3-201ENST00000513203 1877 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS13CQ709C8 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 INTS6P1-201ENST00000504674 2530 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS13CQ709C8 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 RPL17P50-201ENST00000396131 546 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 DBIP1-201ENST00000401435 260 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 AC093655.2-201ENST00000425735 631 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 NDUFA12P1-201ENST00000455914 406 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 SLC25A15P5-201ENST00000508033 253 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 AC034205.1-201ENST00000520621 638 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms