Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC234775.3-201ENST00000564612 656 ntBASIC4.91□□□□□ -1.62
LMO4P61968 AC010547.6-201ENST00000571789 193 ntBASIC4.91□□□□□ -1.62
LMO4P61968 AC027334.1-201ENST00000603257 310 ntBASIC4.91□□□□□ -1.62
LMO4P61968 AL133406.3-201ENST00000606817 541 ntBASIC4.91□□□□□ -1.62
LMO4P61968 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.91□□□□□ -1.62
LMO4P61968 uc_338.26-201ENST00000612659 160 ntBASIC4.91□□□□□ -1.62
LMO4P61968 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.91□□□□□ -1.62
LMO4P61968 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.91□□□□□ -1.62
LMO4P61968 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC4.91□□□□□ -1.62
LMO4P61968 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
LMO4P61968 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
LMO4P61968 SHQ1P1-201ENST00000437111 1544 ntBASIC4.91□□□□□ -1.62
LMO4P61968 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
LMO4P61968 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
LMO4P61968 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
LMO4P61968 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
LMO4P61968 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.9□□□□□ -1.62
LMO4P61968 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
LMO4P61968 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
LMO4P61968 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
LMO4P61968 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
LMO4P61968 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC4.9□□□□□ -1.62
LMO4P61968 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC4.9□□□□□ -1.62
LMO4P61968 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC4.9□□□□□ -1.62
LMO4P61968 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
LMO4P61968 RNA5SP211-201ENST00000365516 117 ntBASIC4.9□□□□□ -1.63
LMO4P61968 SNORA40.4-201ENST00000390971 128 ntBASIC4.9□□□□□ -1.63
LMO4P61968 RN7SKP29-201ENST00000410957 272 ntBASIC4.9□□□□□ -1.63
LMO4P61968 MYL6P5-201ENST00000412707 459 ntBASIC4.9□□□□□ -1.63
LMO4P61968 MRPL53P1-201ENST00000414323 319 ntBASIC4.9□□□□□ -1.63
LMO4P61968 AK4P4-201ENST00000419465 646 ntBASIC4.9□□□□□ -1.63
LMO4P61968 AC007568.1-201ENST00000422912 471 ntBASIC4.9□□□□□ -1.63
LMO4P61968 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC4.9□□□□□ -1.63
LMO4P61968 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
LMO4P61968 AL121776.1-201ENST00000429337 372 ntBASIC4.9□□□□□ -1.63
LMO4P61968 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.9□□□□□ -1.63
LMO4P61968 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.9□□□□□ -1.63
LMO4P61968 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
LMO4P61968 RPSAP39-201ENST00000467439 883 ntBASIC4.9□□□□□ -1.63
LMO4P61968 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
LMO4P61968 RPSAP37-201ENST00000470913 821 ntBASIC4.9□□□□□ -1.63
LMO4P61968 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC4.9□□□□□ -1.63
LMO4P61968 MTND3P3-201ENST00000505004 126 ntBASIC4.9□□□□□ -1.63
LMO4P61968 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.9□□□□□ -1.63
LMO4P61968 SCARNA21.2-201ENST00000516600 166 ntBASIC4.9□□□□□ -1.63
LMO4P61968 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.9□□□□□ -1.63
LMO4P61968 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.9□□□□□ -1.63
LMO4P61968 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.9□□□□□ -1.63
LMO4P61968 AC090079.2-201ENST00000575289 768 ntBASIC4.9□□□□□ -1.63
LMO4P61968 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.9□□□□□ -1.63
LMO4P61968 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.9□□□□□ -1.63
LMO4P61968 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.9□□□□□ -1.63
LMO4P61968 AC015802.2-201ENST00000589690 189 ntBASIC4.9□□□□□ -1.63
LMO4P61968 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.9□□□□□ -1.63
LMO4P61968 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.9□□□□□ -1.63
LMO4P61968 RPL21P136-201ENST00000605378 396 ntBASIC4.9□□□□□ -1.63
LMO4P61968 AC004477.3-201ENST00000614061 590 ntBASIC4.9□□□□□ -1.63
LMO4P61968 AL139099.4-201ENST00000614802 114 ntBASIC4.9□□□□□ -1.63
LMO4P61968 AC020923.1-201ENST00000624021 917 ntBASIC4.9□□□□□ -1.63
LMO4P61968 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC4.9□□□□□ -1.63
LMO4P61968 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.9□□□□□ -1.63
LMO4P61968 AL049767.1-202ENST00000637826 242 ntBASIC4.9□□□□□ -1.63
LMO4P61968 AC009452.1-201ENST00000640823 606 ntBASIC4.9□□□□□ -1.63
LMO4P61968 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.9□□□□□ -1.63
LMO4P61968 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.9□□□□□ -1.63
LMO4P61968 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LMO4P61968 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
LMO4P61968 AL161901.1-201ENST00000624954 3425 ntBASIC4.9□□□□□ -1.63
LMO4P61968 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LMO4P61968 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.9□□□□□ -1.63
LMO4P61968 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LMO4P61968 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LMO4P61968 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LMO4P61968 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
LMO4P61968 CASC19-255ENST00000641733 1385 ntBASIC4.9□□□□□ -1.63
LMO4P61968 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LMO4P61968 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC4.9□□□□□ -1.63
LMO4P61968 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
LMO4P61968 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LMO4P61968 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
LMO4P61968 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC4.89□□□□□ -1.63
LMO4P61968 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC4.89□□□□□ -1.63
LMO4P61968 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC4.89□□□□□ -1.63
LMO4P61968 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LMO4P61968 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
LMO4P61968 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LMO4P61968 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.89□□□□□ -1.63
LMO4P61968 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LMO4P61968 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LMO4P61968 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LMO4P61968 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LMO4P61968 RNA5SP394-201ENST00000364216 119 ntBASIC4.89□□□□□ -1.63
LMO4P61968 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms