Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN18P56856 AC009963.4-201ENST00000448535 339 ntBASIC5.36□□□□□ -1.55
CLDN18P56856 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.36□□□□□ -1.55
CLDN18P56856 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDN18P56856 SDC4P-201ENST00000453285 601 ntBASIC5.36□□□□□ -1.55
CLDN18P56856 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.36□□□□□ -1.55
CLDN18P56856 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN18P56856 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN18P56856 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN18P56856 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDN18P56856 AP000648.1-201ENST00000529682 397 ntBASIC5.36□□□□□ -1.55
CLDN18P56856 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN18P56856 PCNAP4-201ENST00000532690 730 ntBASIC5.36□□□□□ -1.55
CLDN18P56856 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDN18P56856 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN18P56856 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN18P56856 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CLDN18P56856 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDN18P56856 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN18P56856 AC004890.3-201ENST00000605566 1095 ntBASIC5.36□□□□□ -1.55
CLDN18P56856 AL031601.1-201ENST00000605702 394 ntBASIC5.36□□□□□ -1.55
CLDN18P56856 uc_338.26-201ENST00000612659 160 ntBASIC5.36□□□□□ -1.55
CLDN18P56856 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN18P56856 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.36□□□□□ -1.55
CLDN18P56856 AC011504.1-201ENST00000623331 4103 ntBASIC5.36□□□□□ -1.55
CLDN18P56856 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN18P56856 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN18P56856 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN18P56856 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CLDN18P56856 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CLDN18P56856 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN18P56856 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CLDN18P56856 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN18P56856 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CLDN18P56856 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN18P56856 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN18P56856 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN18P56856 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.35□□□□□ -1.55
CLDN18P56856 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.35□□□□□ -1.55
CLDN18P56856 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.35□□□□□ -1.55
CLDN18P56856 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN18P56856 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDN18P56856 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDN18P56856 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN18P56856 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDN18P56856 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN18P56856 AC091305.2-201ENST00000624049 1576 ntBASIC5.35□□□□□ -1.55
CLDN18P56856 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.35□□□□□ -1.55
CLDN18P56856 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CLDN18P56856 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CLDN18P56856 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN18P56856 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN18P56856 RN7SKP128-201ENST00000364270 303 ntBASIC5.35□□□□□ -1.55
CLDN18P56856 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CLDN18P56856 U3.23-201ENST00000391132 200 ntBASIC5.35□□□□□ -1.55
CLDN18P56856 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDN18P56856 AC016739.1-201ENST00000405359 345 ntBASIC5.35□□□□□ -1.55
CLDN18P56856 MYL6P5-201ENST00000412707 459 ntBASIC5.35□□□□□ -1.55
CLDN18P56856 CBX1P3-201ENST00000413296 527 ntBASIC5.35□□□□□ -1.55
CLDN18P56856 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.35□□□□□ -1.55
CLDN18P56856 AC015977.1-201ENST00000418887 292 ntBASIC5.35□□□□□ -1.55
CLDN18P56856 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN18P56856 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN18P56856 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.35□□□□□ -1.55
CLDN18P56856 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN18P56856 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN18P56856 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN18P56856 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN18P56856 AL161722.1-201ENST00000446972 1032 ntBASIC5.35□□□□□ -1.55
CLDN18P56856 AC016724.1-201ENST00000453215 421 ntBASIC5.35□□□□□ -1.55
CLDN18P56856 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.35□□□□□ -1.55
CLDN18P56856 AC011476.1-201ENST00000466725 307 ntBASIC5.35□□□□□ -1.55
CLDN18P56856 AC124945.1-201ENST00000485133 188 ntBASIC5.35□□□□□ -1.55
CLDN18P56856 AC008945.1-201ENST00000505144 499 ntBASIC5.35□□□□□ -1.55
CLDN18P56856 IGKV2-19-201ENST00000518132 283 ntBASIC5.35□□□□□ -1.55
CLDN18P56856 IGKV2-4-201ENST00000523070 340 ntBASIC5.35□□□□□ -1.55
CLDN18P56856 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDN18P56856 AL356801.1-201ENST00000559320 294 ntBASIC5.35□□□□□ -1.55
CLDN18P56856 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDN18P56856 AC090286.3-201ENST00000573133 187 ntBASIC5.35□□□□□ -1.55
CLDN18P56856 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.35□□□□□ -1.55
CLDN18P56856 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN18P56856 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN18P56856 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CLDN18P56856 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN18P56856 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN18P56856 AL121768.1-201ENST00000613917 2544 ntBASIC5.35□□□□□ -1.55
CLDN18P56856 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
CLDN18P56856 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.35□□□□□ -1.55
CLDN18P56856 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDN18P56856 AC123769.1-201ENST00000530992 3192 ntBASIC5.34□□□□□ -1.55
CLDN18P56856 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN18P56856 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CLDN18P56856 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN18P56856 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
CLDN18P56856 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN18P56856 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN18P56856 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CLDN18P56856 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CLDN18P56856 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms