Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
CLTCL1P53675 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CLTCL1P53675 Z82209.2-201ENST00000623410 2012 ntBASIC8.12□□□□□ -1.11
CLTCL1P53675 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CLTCL1P53675 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CLTCL1P53675 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC8.12□□□□□ -1.11
CLTCL1P53675 RNA5SP507-201ENST00000363603 121 ntBASIC8.12□□□□□ -1.11
CLTCL1P53675 SNORA70H-201ENST00000383910 135 ntBASIC8.12□□□□□ -1.11
CLTCL1P53675 SNORA70J-201ENST00000384182 135 ntBASIC8.12□□□□□ -1.11
CLTCL1P53675 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC8.12□□□□□ -1.11
CLTCL1P53675 EEF1B2P5-201ENST00000444820 548 ntBASIC8.12□□□□□ -1.11
CLTCL1P53675 AL606490.1-201ENST00000452266 765 ntBASIC8.12□□□□□ -1.11
CLTCL1P53675 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CLTCL1P53675 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC8.12□□□□□ -1.11
CLTCL1P53675 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC8.12□□□□□ -1.11
CLTCL1P53675 PGAM1P13-201ENST00000507497 754 ntBASIC8.12□□□□□ -1.11
CLTCL1P53675 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC8.12□□□□□ -1.11
CLTCL1P53675 IGLV2-28-201ENST00000520681 304 ntBASIC8.12□□□□□ -1.11
CLTCL1P53675 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC8.12□□□□□ -1.11
CLTCL1P53675 MAL2-207ENST00000522828 603 ntTSL 3 BASIC8.12□□□□□ -1.11
CLTCL1P53675 OR11J2P-201ENST00000555298 907 ntBASIC8.12□□□□□ -1.11
CLTCL1P53675 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC8.12□□□□□ -1.11
CLTCL1P53675 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC8.12□□□□□ -1.11
CLTCL1P53675 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC8.12□□□□□ -1.11
CLTCL1P53675 PWAR1-201ENST00000624188 2414 ntBASIC8.12□□□□□ -1.11
CLTCL1P53675 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC8.12□□□□□ -1.11
CLTCL1P53675 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CLTCL1P53675 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CLTCL1P53675 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CLTCL1P53675 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CLTCL1P53675 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CLTCL1P53675 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC8.11□□□□□ -1.11
CLTCL1P53675 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC8.11□□□□□ -1.11
CLTCL1P53675 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CLTCL1P53675 OTX2P1-201ENST00000450956 354 ntBASIC8.11□□□□□ -1.11
CLTCL1P53675 RPS21P4-201ENST00000487122 248 ntBASIC8.11□□□□□ -1.11
CLTCL1P53675 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC8.11□□□□□ -1.11
CLTCL1P53675 NDUFA5P12-201ENST00000503796 343 ntBASIC8.11□□□□□ -1.11
CLTCL1P53675 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC8.11□□□□□ -1.11
CLTCL1P53675 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC8.11□□□□□ -1.11
CLTCL1P53675 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC8.11□□□□□ -1.11
CLTCL1P53675 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CLTCL1P53675 ZNF658B-201ENST00000602828 3408 ntBASIC8.11□□□□□ -1.11
CLTCL1P53675 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CLTCL1P53675 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
CLTCL1P53675 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CLTCL1P53675 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC8.11□□□□□ -1.11
CLTCL1P53675 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
CLTCL1P53675 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
CLTCL1P53675 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CLTCL1P53675 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.11□□□□□ -1.11
CLTCL1P53675 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CLTCL1P53675 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC8.11□□□□□ -1.11
CLTCL1P53675 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CLTCL1P53675 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CLTCL1P53675 RNA5SP326-201ENST00000363209 110 ntBASIC8.11□□□□□ -1.11
CLTCL1P53675 AC005042.1-201ENST00000393397 800 ntBASIC8.11□□□□□ -1.11
CLTCL1P53675 AC009804.1-201ENST00000400949 179 ntBASIC8.11□□□□□ -1.11
CLTCL1P53675 AL121835.1-201ENST00000404250 354 ntBASIC8.11□□□□□ -1.11
CLTCL1P53675 AC005033.1-201ENST00000428904 813 ntBASIC8.11□□□□□ -1.11
CLTCL1P53675 RN7SL329P-201ENST00000467740 299 ntBASIC8.11□□□□□ -1.11
CLTCL1P53675 OR2AO1P-201ENST00000476497 403 ntBASIC8.11□□□□□ -1.11
CLTCL1P53675 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC8.11□□□□□ -1.11
CLTCL1P53675 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC8.11□□□□□ -1.11
CLTCL1P53675 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CLTCL1P53675 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC8.11□□□□□ -1.11
CLTCL1P53675 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC8.11□□□□□ -1.11
CLTCL1P53675 CDC42P3-201ENST00000518493 633 ntBASIC8.11□□□□□ -1.11
CLTCL1P53675 AC126915.2-201ENST00000610957 190 ntBASIC8.11□□□□□ -1.11
CLTCL1P53675 RPSAP73-201ENST00000614820 330 ntBASIC8.11□□□□□ -1.11
CLTCL1P53675 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC8.11□□□□□ -1.11
CLTCL1P53675 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CLTCL1P53675 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CLTCL1P53675 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CLTCL1P53675 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC8.1□□□□□ -1.11
CLTCL1P53675 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
CLTCL1P53675 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CLTCL1P53675 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC8.1□□□□□ -1.11
CLTCL1P53675 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CLTCL1P53675 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CLTCL1P53675 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CLTCL1P53675 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
CLTCL1P53675 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC8.1□□□□□ -1.11
CLTCL1P53675 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC8.1□□□□□ -1.11
CLTCL1P53675 AC104581.5-201ENST00000624171 7141 ntBASIC8.1□□□□□ -1.11
CLTCL1P53675 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CLTCL1P53675 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC8.1□□□□□ -1.11
CLTCL1P53675 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
CLTCL1P53675 AK3P5-201ENST00000432033 519 ntBASIC8.1□□□□□ -1.11
CLTCL1P53675 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC8.1□□□□□ -1.11
CLTCL1P53675 RN7SL808P-201ENST00000496066 299 ntBASIC8.1□□□□□ -1.11
CLTCL1P53675 FTH1P8-201ENST00000498161 514 ntBASIC8.1□□□□□ -1.11
CLTCL1P53675 APPL2-203ENST00000546731 684 ntTSL 2 BASIC8.1□□□□□ -1.11
CLTCL1P53675 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CLTCL1P53675 AP002505.2-201ENST00000623585 696 ntBASIC8.1□□□□□ -1.11
CLTCL1P53675 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CLTCL1P53675 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC8.1□□□□□ -1.11
CLTCL1P53675 UBA3-213ENST00000631029 123 ntTSL 5 BASIC8.1□□□□□ -1.11
CLTCL1P53675 AC092070.2-203ENST00000598377 3644 ntBASIC8.1□□□□□ -1.11
CLTCL1P53675 WBP11P1-201ENST00000562560 1931 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms