Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RN7SKP275-201ENST00000364626 301 ntBASIC6.49□□□□□ -1.37
COPAP53621 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COPAP53621 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.49□□□□□ -1.37
COPAP53621 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.49□□□□□ -1.37
COPAP53621 RNU2-22P-201ENST00000411266 212 ntBASIC6.49□□□□□ -1.37
COPAP53621 AL445213.1-201ENST00000412589 747 ntBASIC6.49□□□□□ -1.37
COPAP53621 AL356968.2-201ENST00000412769 1257 ntBASIC6.49□□□□□ -1.37
COPAP53621 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.49□□□□□ -1.37
COPAP53621 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.49□□□□□ -1.37
COPAP53621 AL034379.1-201ENST00000423216 253 ntBASIC6.49□□□□□ -1.37
COPAP53621 AC097721.1-201ENST00000427150 1253 ntBASIC6.49□□□□□ -1.37
COPAP53621 ELOCP6-201ENST00000429066 328 ntBASIC6.49□□□□□ -1.37
COPAP53621 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.49□□□□□ -1.37
COPAP53621 ARL5AP3-201ENST00000439327 386 ntBASIC6.49□□□□□ -1.37
COPAP53621 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.49□□□□□ -1.37
COPAP53621 GXYLT1P1-201ENST00000446657 490 ntBASIC6.49□□□□□ -1.37
COPAP53621 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.49□□□□□ -1.37
COPAP53621 ELOCP12-201ENST00000458706 328 ntBASIC6.49□□□□□ -1.37
COPAP53621 AC090543.1-201ENST00000492168 485 ntBASIC6.49□□□□□ -1.37
COPAP53621 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.49□□□□□ -1.37
COPAP53621 RN7SKP67-201ENST00000515905 235 ntBASIC6.49□□□□□ -1.37
COPAP53621 RNU6-491P-201ENST00000516099 110 ntBASIC6.49□□□□□ -1.37
COPAP53621 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
COPAP53621 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.49□□□□□ -1.37
COPAP53621 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.49□□□□□ -1.37
COPAP53621 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.49□□□□□ -1.37
COPAP53621 LINC00556-201ENST00000569603 412 ntBASIC6.49□□□□□ -1.37
COPAP53621 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.49□□□□□ -1.37
COPAP53621 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COPAP53621 AP001002.2-201ENST00000625137 386 ntBASIC6.49□□□□□ -1.37
COPAP53621 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
COPAP53621 SAGE3P-201ENST00000619800 1635 ntBASIC6.49□□□□□ -1.37
COPAP53621 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COPAP53621 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.49□□□□□ -1.37
COPAP53621 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
COPAP53621 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.49□□□□□ -1.37
COPAP53621 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
COPAP53621 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.49□□□□□ -1.37
COPAP53621 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COPAP53621 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COPAP53621 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COPAP53621 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.49□□□□□ -1.37
COPAP53621 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
COPAP53621 CASC19-228ENST00000641414 1684 ntBASIC6.49□□□□□ -1.37
COPAP53621 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COPAP53621 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COPAP53621 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COPAP53621 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COPAP53621 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COPAP53621 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.48□□□□□ -1.37
COPAP53621 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.48□□□□□ -1.37
COPAP53621 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COPAP53621 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COPAP53621 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COPAP53621 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.48□□□□□ -1.37
COPAP53621 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COPAP53621 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
COPAP53621 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
COPAP53621 AL356057.1-202ENST00000402263 756 ntBASIC6.48□□□□□ -1.37
COPAP53621 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.48□□□□□ -1.37
COPAP53621 AC234781.4-201ENST00000419384 244 ntBASIC6.48□□□□□ -1.37
COPAP53621 UBE2V1P6-201ENST00000430840 422 ntBASIC6.48□□□□□ -1.37
COPAP53621 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COPAP53621 AL389925.1-201ENST00000432257 728 ntBASIC6.48□□□□□ -1.37
COPAP53621 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.48□□□□□ -1.37
COPAP53621 AMYP1-201ENST00000440059 1023 ntBASIC6.48□□□□□ -1.37
COPAP53621 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COPAP53621 RPL12P31-201ENST00000478433 450 ntBASIC6.48□□□□□ -1.37
COPAP53621 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.48□□□□□ -1.37
COPAP53621 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
COPAP53621 IGKV2-4-201ENST00000523070 340 ntBASIC6.48□□□□□ -1.37
COPAP53621 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.48□□□□□ -1.37
COPAP53621 AP004609.2-201ENST00000532177 190 ntBASIC6.48□□□□□ -1.37
COPAP53621 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.48□□□□□ -1.37
COPAP53621 MIR4701-201ENST00000583094 63 ntBASIC6.48□□□□□ -1.37
COPAP53621 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.48□□□□□ -1.37
COPAP53621 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.48□□□□□ -1.37
COPAP53621 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.48□□□□□ -1.37
COPAP53621 LSM1P2-201ENST00000604911 322 ntBASIC6.48□□□□□ -1.37
COPAP53621 AL139022.2-201ENST00000606934 443 ntBASIC6.48□□□□□ -1.37
COPAP53621 AC025171.4-201ENST00000607250 1047 ntBASIC6.48□□□□□ -1.37
COPAP53621 AC015982.1-201ENST00000608113 465 ntBASIC6.48□□□□□ -1.37
COPAP53621 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.48□□□□□ -1.37
COPAP53621 AL080312.2-201ENST00000613001 630 ntBASIC6.48□□□□□ -1.37
COPAP53621 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COPAP53621 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COPAP53621 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
COPAP53621 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COPAP53621 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.48□□□□□ -1.37
COPAP53621 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COPAP53621 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COPAP53621 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COPAP53621 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COPAP53621 AP000432.2-201ENST00000624164 2048 ntBASIC6.47□□□□□ -1.37
COPAP53621 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
COPAP53621 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COPAP53621 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
COPAP53621 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COPAP53621 AL592494.2-201ENST00000425455 1548 ntBASIC6.47□□□□□ -1.37
COPAP53621 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms