Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.01□□□□□ -1.61
NKX2-1P43699 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-1P43699 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
NKX2-1P43699 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-1P43699 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-1P43699 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-1P43699 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
NKX2-1P43699 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.01□□□□□ -1.61
NKX2-1P43699 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
NKX2-1P43699 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-1P43699 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
NKX2-1P43699 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-1P43699 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-1P43699 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
NKX2-1P43699 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-1P43699 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-1P43699 SLC2A3P4-201ENST00000521259 1471 ntBASIC5□□□□□ -1.61
NKX2-1P43699 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
NKX2-1P43699 AC095038.1-201ENST00000429248 1591 ntBASIC5□□□□□ -1.61
NKX2-1P43699 UGT2B24P-201ENST00000514441 1597 ntBASIC5□□□□□ -1.61
NKX2-1P43699 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5□□□□□ -1.61
NKX2-1P43699 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NKX2-1P43699 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5□□□□□ -1.61
NKX2-1P43699 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5□□□□□ -1.61
NKX2-1P43699 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5□□□□□ -1.61
NKX2-1P43699 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NKX2-1P43699 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NKX2-1P43699 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
NKX2-1P43699 SNORA43.1-201ENST00000364863 140 ntBASIC5□□□□□ -1.61
NKX2-1P43699 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5□□□□□ -1.61
NKX2-1P43699 AL139100.1-201ENST00000408001 498 ntBASIC5□□□□□ -1.61
NKX2-1P43699 RN7SKP91-201ENST00000410852 288 ntBASIC5□□□□□ -1.61
NKX2-1P43699 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5□□□□□ -1.61
NKX2-1P43699 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5□□□□□ -1.61
NKX2-1P43699 BTF3P9-201ENST00000418784 283 ntBASIC5□□□□□ -1.61
NKX2-1P43699 AC234781.4-201ENST00000419384 244 ntBASIC5□□□□□ -1.61
NKX2-1P43699 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5□□□□□ -1.61
NKX2-1P43699 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5□□□□□ -1.61
NKX2-1P43699 AHCYP8-201ENST00000425108 209 ntBASIC5□□□□□ -1.61
NKX2-1P43699 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5□□□□□ -1.61
NKX2-1P43699 RPL3P11-201ENST00000434028 1146 ntBASIC5□□□□□ -1.61
NKX2-1P43699 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5□□□□□ -1.61
NKX2-1P43699 AP000949.1-201ENST00000438328 629 ntBASIC5□□□□□ -1.61
NKX2-1P43699 AL356133.1-201ENST00000444762 372 ntBASIC5□□□□□ -1.61
NKX2-1P43699 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5□□□□□ -1.61
NKX2-1P43699 AL353718.1-201ENST00000451028 517 ntBASIC5□□□□□ -1.61
NKX2-1P43699 EIF3LP2-201ENST00000457262 807 ntBASIC5□□□□□ -1.61
NKX2-1P43699 AC108751.3-201ENST00000461814 1020 ntBASIC5□□□□□ -1.61
NKX2-1P43699 RPSAP39-201ENST00000467439 883 ntBASIC5□□□□□ -1.61
NKX2-1P43699 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5□□□□□ -1.61
NKX2-1P43699 UOX-201ENST00000471089 899 ntBASIC5□□□□□ -1.61
NKX2-1P43699 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5□□□□□ -1.61
NKX2-1P43699 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5□□□□□ -1.61
NKX2-1P43699 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5□□□□□ -1.61
NKX2-1P43699 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5□□□□□ -1.61
NKX2-1P43699 TOMM22P4-201ENST00000511318 336 ntBASIC5□□□□□ -1.61
NKX2-1P43699 SETP12-201ENST00000514068 805 ntBASIC5□□□□□ -1.61
NKX2-1P43699 RNU6-889P-201ENST00000517189 103 ntBASIC5□□□□□ -1.61
NKX2-1P43699 AC019227.1-201ENST00000526902 510 ntBASIC5□□□□□ -1.61
NKX2-1P43699 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NKX2-1P43699 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5□□□□□ -1.61
NKX2-1P43699 AL136520.1-202ENST00000555494 763 ntBASIC5□□□□□ -1.61
NKX2-1P43699 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5□□□□□ -1.61
NKX2-1P43699 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5□□□□□ -1.61
NKX2-1P43699 AC016839.1-201ENST00000578162 867 ntBASIC5□□□□□ -1.61
NKX2-1P43699 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5□□□□□ -1.61
NKX2-1P43699 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5□□□□□ -1.61
NKX2-1P43699 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5□□□□□ -1.61
NKX2-1P43699 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5□□□□□ -1.61
NKX2-1P43699 AC004805.3-201ENST00000603178 310 ntBASIC5□□□□□ -1.61
NKX2-1P43699 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5□□□□□ -1.61
NKX2-1P43699 AC016542.1-201ENST00000608259 493 ntBASIC5□□□□□ -1.61
NKX2-1P43699 RNA5SP439-201ENST00000617595 124 ntBASIC5□□□□□ -1.61
NKX2-1P43699 AC020978.9-201ENST00000624380 1141 ntBASIC5□□□□□ -1.61
NKX2-1P43699 AC019080.5-201ENST00000624891 757 ntBASIC5□□□□□ -1.61
NKX2-1P43699 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5□□□□□ -1.61
NKX2-1P43699 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5□□□□□ -1.61
NKX2-1P43699 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5□□□□□ -1.61
NKX2-1P43699 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
NKX2-1P43699 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
NKX2-1P43699 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NKX2-1P43699 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5□□□□□ -1.61
NKX2-1P43699 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5□□□□□ -1.61
NKX2-1P43699 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5□□□□□ -1.61
NKX2-1P43699 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NKX2-1P43699 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5□□□□□ -1.61
NKX2-1P43699 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5□□□□□ -1.61
NKX2-1P43699 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-1P43699 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NKX2-1P43699 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.99□□□□□ -1.61
NKX2-1P43699 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC4.99□□□□□ -1.61
NKX2-1P43699 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-1P43699 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NKX2-1P43699 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.99□□□□□ -1.61
NKX2-1P43699 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.99□□□□□ -1.61
NKX2-1P43699 AC107977.1-201ENST00000355745 939 ntBASIC4.99□□□□□ -1.61
NKX2-1P43699 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC4.99□□□□□ -1.61
NKX2-1P43699 SNORA77.2-201ENST00000408571 112 ntBASIC4.99□□□□□ -1.61
NKX2-1P43699 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-1P43699 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms