Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.26□□□□□ -1.41
PDGFRAP16234 LSM3P4-201ENST00000502948 309 ntBASIC6.26□□□□□ -1.41
PDGFRAP16234 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.26□□□□□ -1.41
PDGFRAP16234 SETP21-201ENST00000514799 892 ntBASIC6.26□□□□□ -1.41
PDGFRAP16234 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFRAP16234 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.26□□□□□ -1.41
PDGFRAP16234 AC244502.2-201ENST00000543361 851 ntBASIC6.26□□□□□ -1.41
PDGFRAP16234 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.26□□□□□ -1.41
PDGFRAP16234 AP005119.1-201ENST00000580956 292 ntBASIC6.26□□□□□ -1.41
PDGFRAP16234 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.26□□□□□ -1.41
PDGFRAP16234 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.26□□□□□ -1.41
PDGFRAP16234 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.26□□□□□ -1.41
PDGFRAP16234 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFRAP16234 AP005212.4-201ENST00000614206 710 ntBASIC6.26□□□□□ -1.41
PDGFRAP16234 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.26□□□□□ -1.41
PDGFRAP16234 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFRAP16234 IMMTP1-201ENST00000435590 2219 ntBASIC6.26□□□□□ -1.41
PDGFRAP16234 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
PDGFRAP16234 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.26□□□□□ -1.41
PDGFRAP16234 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFRAP16234 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFRAP16234 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFRAP16234 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.25□□□□□ -1.41
PDGFRAP16234 AC020656.2-201ENST00000613291 5309 ntBASIC6.25□□□□□ -1.41
PDGFRAP16234 QRSL1P1-201ENST00000400977 1540 ntBASIC6.25□□□□□ -1.41
PDGFRAP16234 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PDGFRAP16234 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFRAP16234 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFRAP16234 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFRAP16234 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
PDGFRAP16234 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
PDGFRAP16234 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PDGFRAP16234 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFRAP16234 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
PDGFRAP16234 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFRAP16234 GNG5P2-201ENST00000372054 207 ntBASIC6.25□□□□□ -1.41
PDGFRAP16234 SNORA11.3-201ENST00000408471 128 ntBASIC6.25□□□□□ -1.41
PDGFRAP16234 RPL35AP3-201ENST00000414680 288 ntBASIC6.25□□□□□ -1.41
PDGFRAP16234 RPL23AP18-201ENST00000416139 468 ntBASIC6.25□□□□□ -1.41
PDGFRAP16234 DPPA2P2-201ENST00000418220 897 ntBASIC6.25□□□□□ -1.41
PDGFRAP16234 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFRAP16234 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
PDGFRAP16234 H3F3BP1-201ENST00000440551 403 ntBASIC6.25□□□□□ -1.41
PDGFRAP16234 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.25□□□□□ -1.41
PDGFRAP16234 AC008629.2-201ENST00000503783 483 ntBASIC6.25□□□□□ -1.41
PDGFRAP16234 SNORA81.2-201ENST00000516868 170 ntBASIC6.25□□□□□ -1.41
PDGFRAP16234 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.25□□□□□ -1.41
PDGFRAP16234 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.25□□□□□ -1.41
PDGFRAP16234 OR4A6P-201ENST00000534364 970 ntBASIC6.25□□□□□ -1.41
PDGFRAP16234 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.25□□□□□ -1.41
PDGFRAP16234 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.25□□□□□ -1.41
PDGFRAP16234 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.25□□□□□ -1.41
PDGFRAP16234 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.25□□□□□ -1.41
PDGFRAP16234 AC010615.3-201ENST00000597319 394 ntBASIC6.25□□□□□ -1.41
PDGFRAP16234 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.25□□□□□ -1.41
PDGFRAP16234 AC067773.1-201ENST00000603284 1094 ntBASIC6.25□□□□□ -1.41
PDGFRAP16234 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.25□□□□□ -1.41
PDGFRAP16234 SNORA11.6-201ENST00000619030 128 ntBASIC6.25□□□□□ -1.41
PDGFRAP16234 AC096708.4-201ENST00000620563 552 ntBASIC6.25□□□□□ -1.41
PDGFRAP16234 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.25□□□□□ -1.41
PDGFRAP16234 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
PDGFRAP16234 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
PDGFRAP16234 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFRAP16234 AC073365.1-203ENST00000641055 1992 ntBASIC6.25□□□□□ -1.41
PDGFRAP16234 AC027279.4-201ENST00000624371 2072 ntBASIC6.25□□□□□ -1.41
PDGFRAP16234 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.25□□□□□ -1.41
PDGFRAP16234 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFRAP16234 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
PDGFRAP16234 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
PDGFRAP16234 AC012254.3-201ENST00000591183 2117 ntBASIC6.25□□□□□ -1.41
PDGFRAP16234 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
PDGFRAP16234 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFRAP16234 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
PDGFRAP16234 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFRAP16234 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFRAP16234 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFRAP16234 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.24□□□□□ -1.41
PDGFRAP16234 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.24□□□□□ -1.41
PDGFRAP16234 CASC19-238ENST00000641523 1558 ntBASIC6.24□□□□□ -1.41
PDGFRAP16234 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
PDGFRAP16234 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFRAP16234 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PDGFRAP16234 RNA5SP211-201ENST00000365516 117 ntBASIC6.24□□□□□ -1.41
PDGFRAP16234 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PDGFRAP16234 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
PDGFRAP16234 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.24□□□□□ -1.41
PDGFRAP16234 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFRAP16234 AC099677.3-201ENST00000427081 395 ntBASIC6.24□□□□□ -1.41
PDGFRAP16234 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFRAP16234 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.24□□□□□ -1.41
PDGFRAP16234 RPS7P3-201ENST00000443360 580 ntBASIC6.24□□□□□ -1.41
PDGFRAP16234 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.24□□□□□ -1.41
PDGFRAP16234 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.24□□□□□ -1.41
PDGFRAP16234 CST12P-201ENST00000457644 362 ntBASIC6.24□□□□□ -1.41
PDGFRAP16234 RN7SL269P-201ENST00000467795 305 ntBASIC6.24□□□□□ -1.41
PDGFRAP16234 AC023245.1-201ENST00000468501 517 ntBASIC6.24□□□□□ -1.41
PDGFRAP16234 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.24□□□□□ -1.41
PDGFRAP16234 AC025458.1-201ENST00000506046 166 ntBASIC6.24□□□□□ -1.41
PDGFRAP16234 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.24□□□□□ -1.41
PDGFRAP16234 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms