Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC10.66□□□□□ -0.7
CHGAP10645 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CHGAP10645 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC10.66□□□□□ -0.7
CHGAP10645 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHGAP10645 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
CHGAP10645 CR381653.2-201ENST00000624041 768 ntBASIC10.66□□□□□ -0.7
CHGAP10645 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC10.66□□□□□ -0.7
CHGAP10645 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC10.66□□□□□ -0.7
CHGAP10645 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
CHGAP10645 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHGAP10645 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHGAP10645 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHGAP10645 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC10.66□□□□□ -0.7
CHGAP10645 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
CHGAP10645 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC10.66□□□□□ -0.7
CHGAP10645 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHGAP10645 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC10.66□□□□□ -0.7
CHGAP10645 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CHGAP10645 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC10.66□□□□□ -0.7
CHGAP10645 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC10.66□□□□□ -0.7
CHGAP10645 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CHGAP10645 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC10.65□□□□□ -0.7
CHGAP10645 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CHGAP10645 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CHGAP10645 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC10.65□□□□□ -0.7
CHGAP10645 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC10.65□□□□□ -0.7
CHGAP10645 RN7SKP221-201ENST00000410420 301 ntBASIC10.65□□□□□ -0.7
CHGAP10645 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC10.65□□□□□ -0.7
CHGAP10645 AC138393.2-201ENST00000414742 246 ntBASIC10.65□□□□□ -0.7
CHGAP10645 AL160290.1-201ENST00000415509 416 ntTSL 3 BASIC10.65□□□□□ -0.7
CHGAP10645 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC10.65□□□□□ -0.7
CHGAP10645 SLC44A3-AS1-205ENST00000424505 612 ntBASIC10.65□□□□□ -0.7
CHGAP10645 FO393419.3-201ENST00000428741 282 ntBASIC10.65□□□□□ -0.7
CHGAP10645 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC10.65□□□□□ -0.7
CHGAP10645 AL731892.1-201ENST00000437364 1192 ntBASIC10.65□□□□□ -0.7
CHGAP10645 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC10.65□□□□□ -0.7
CHGAP10645 FUNDC2P2-202ENST00000443452 493 ntBASIC10.65□□□□□ -0.7
CHGAP10645 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC10.65□□□□□ -0.7
CHGAP10645 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC10.65□□□□□ -0.7
CHGAP10645 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC10.65□□□□□ -0.7
CHGAP10645 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC10.65□□□□□ -0.7
CHGAP10645 AL390026.1-201ENST00000456647 457 ntBASIC10.65□□□□□ -0.7
CHGAP10645 VN1R6P-201ENST00000458417 907 ntBASIC10.65□□□□□ -0.7
CHGAP10645 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC10.65□□□□□ -0.7
CHGAP10645 AC104849.1-201ENST00000462623 405 ntBASIC10.65□□□□□ -0.7
CHGAP10645 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC10.65□□□□□ -0.7
CHGAP10645 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC10.65□□□□□ -0.7
CHGAP10645 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC10.65□□□□□ -0.7
CHGAP10645 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC10.65□□□□□ -0.7
CHGAP10645 AC005832.3-201ENST00000537929 631 ntBASIC10.65□□□□□ -0.7
CHGAP10645 YWHABP2-201ENST00000540201 713 ntBASIC10.65□□□□□ -0.7
CHGAP10645 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC10.65□□□□□ -0.7
CHGAP10645 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC10.65□□□□□ -0.7
CHGAP10645 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC10.65□□□□□ -0.7
CHGAP10645 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC10.65□□□□□ -0.7
CHGAP10645 AL049870.4-201ENST00000555741 486 ntBASIC10.65□□□□□ -0.7
CHGAP10645 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC10.65□□□□□ -0.7
CHGAP10645 RPS7P1-201ENST00000571702 585 ntBASIC10.65□□□□□ -0.7
CHGAP10645 OR4K7P-201ENST00000580232 945 ntBASIC10.65□□□□□ -0.7
CHGAP10645 RN7SL66P-201ENST00000582099 264 ntBASIC10.65□□□□□ -0.7
CHGAP10645 AC015871.2-201ENST00000603605 948 ntBASIC10.65□□□□□ -0.7
CHGAP10645 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC10.65□□□□□ -0.7
CHGAP10645 AP000860.1-201ENST00000605250 559 ntBASIC10.65□□□□□ -0.7
CHGAP10645 AC064836.2-201ENST00000609491 462 ntBASIC10.65□□□□□ -0.7
CHGAP10645 AC026108.1-201ENST00000635444 547 ntBASIC10.65□□□□□ -0.7
CHGAP10645 LINC01739-205ENST00000641890 573 ntBASIC10.65□□□□□ -0.7
CHGAP10645 OR7E161P-202ENST00000641994 1033 ntBASIC10.65□□□□□ -0.7
CHGAP10645 AC036108.4-201ENST00000611654 2516 ntBASIC10.65□□□□□ -0.7
CHGAP10645 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
CHGAP10645 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
CHGAP10645 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC10.65□□□□□ -0.7
CHGAP10645 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CHGAP10645 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
CHGAP10645 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CHGAP10645 MAPK10-371ENST00000641952 5209 ntBASIC10.65□□□□□ -0.71
CHGAP10645 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
CHGAP10645 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
CHGAP10645 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CHGAP10645 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC10.65□□□□□ -0.71
CHGAP10645 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC10.65□□□□□ -0.71
CHGAP10645 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CHGAP10645 AC009220.2-201ENST00000489759 1751 ntBASIC10.65□□□□□ -0.71
CHGAP10645 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
CHGAP10645 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
CHGAP10645 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CHGAP10645 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
CHGAP10645 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
CHGAP10645 AL627309.1-201ENST00000466430 2748 ntTSL 5 BASIC10.64□□□□□ -0.71
CHGAP10645 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC10.64□□□□□ -0.71
CHGAP10645 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
CHGAP10645 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC10.64□□□□□ -0.71
CHGAP10645 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHGAP10645 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHGAP10645 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CHGAP10645 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CHGAP10645 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
CHGAP10645 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHGAP10645 Y_RNA.256-201ENST00000364594 104 ntBASIC10.64□□□□□ -0.71
CHGAP10645 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC10.64□□□□□ -0.71
CHGAP10645 MIR551B-201ENST00000384984 96 ntBASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms