Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.2□□□□□ -1.26
PDGFAP04085 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.2□□□□□ -1.26
PDGFAP04085 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC7.2□□□□□ -1.26
PDGFAP04085 AL589765.5-201ENST00000596133 515 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 AL390816.3-201ENST00000604527 1066 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 U1.22-201ENST00000605806 164 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 AC004067.1-201ENST00000608733 700 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC7.2□□□□□ -1.26
PDGFAP04085 AL356321.1-201ENST00000621360 228 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 AL132796.3-201ENST00000624703 900 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 ASB8-218ENST00000629941 278 ntTSL 5 BASIC7.2□□□□□ -1.26
PDGFAP04085 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PDGFAP04085 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PDGFAP04085 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PDGFAP04085 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC7.2□□□□□ -1.26
PDGFAP04085 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC7.2□□□□□ -1.26
PDGFAP04085 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PDGFAP04085 DCAF13P3-201ENST00000561147 1334 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC7.2□□□□□ -1.26
PDGFAP04085 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC7.2□□□□□ -1.26
PDGFAP04085 AL079343.1-201ENST00000572358 1771 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC7.2□□□□□ -1.26
PDGFAP04085 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PDGFAP04085 AC092111.1-201ENST00000618256 3358 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
PDGFAP04085 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PDGFAP04085 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
PDGFAP04085 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
PDGFAP04085 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC7.2□□□□□ -1.26
PDGFAP04085 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC7.19□□□□□ -1.26
PDGFAP04085 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
PDGFAP04085 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
PDGFAP04085 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
PDGFAP04085 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.19□□□□□ -1.26
PDGFAP04085 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC7.19□□□□□ -1.26
PDGFAP04085 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
PDGFAP04085 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 Y_RNA.408-201ENST00000383987 102 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 RNU6-1263P-201ENST00000384601 106 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 SNORA11C-201ENST00000408532 129 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 FTH1P5-201ENST00000425761 545 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 BLOC1S2P1-201ENST00000428431 301 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC7.19□□□□□ -1.26
PDGFAP04085 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC7.19□□□□□ -1.26
PDGFAP04085 Z98752.2-201ENST00000432727 312 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 MTND3P21-201ENST00000433774 331 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC7.19□□□□□ -1.26
PDGFAP04085 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC7.19□□□□□ -1.26
PDGFAP04085 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC7.19□□□□□ -1.26
PDGFAP04085 AC003071.1-201ENST00000451219 789 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC7.19□□□□□ -1.26
PDGFAP04085 AC021205.1-201ENST00000468797 348 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 TUBBP11-201ENST00000472255 252 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.19□□□□□ -1.26
PDGFAP04085 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC7.19□□□□□ -1.26
PDGFAP04085 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.19□□□□□ -1.26
PDGFAP04085 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC7.19□□□□□ -1.26
PDGFAP04085 RNU6-718P-201ENST00000516166 105 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 RNU6-416P-201ENST00000516265 103 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 CDC42P3-201ENST00000518493 633 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 AC135983.3-201ENST00000528049 1226 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 DEFB108A-201ENST00000530110 222 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC7.19□□□□□ -1.26
PDGFAP04085 NPIPB14P-203ENST00000532298 987 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC7.19□□□□□ -1.26
PDGFAP04085 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC7.19□□□□□ -1.26
PDGFAP04085 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC7.19□□□□□ -1.26
PDGFAP04085 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC7.19□□□□□ -1.26
PDGFAP04085 RPS28P1-201ENST00000604589 187 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC7.19□□□□□ -1.26
PDGFAP04085 RN7SL82P-201ENST00000611435 237 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 FRG2MP-201ENST00000613317 856 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 AL357080.1-201ENST00000617394 239 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 RN7SL628P-201ENST00000619139 237 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC7.19□□□□□ -1.26
PDGFAP04085 AC024580.1-201ENST00000623020 674 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.19□□□□□ -1.26
PDGFAP04085 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.19□□□□□ -1.26
PDGFAP04085 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
PDGFAP04085 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
PDGFAP04085 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
PDGFAP04085 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC7.19□□□□□ -1.26
PDGFAP04085 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
PDGFAP04085 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms