Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
APOEP02649 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
APOEP02649 AC140134.1-201ENST00000511830 3544 ntBASIC6.22□□□□□ -1.41
APOEP02649 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
APOEP02649 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
APOEP02649 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
APOEP02649 RNFT1P3-201ENST00000340898 1052 ntBASIC6.22□□□□□ -1.41
APOEP02649 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
APOEP02649 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
APOEP02649 SNORD1C-201ENST00000363315 78 ntBASIC6.22□□□□□ -1.41
APOEP02649 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
APOEP02649 AL121977.1-201ENST00000401636 979 ntBASIC6.22□□□□□ -1.41
APOEP02649 MYL6P5-201ENST00000412707 459 ntBASIC6.22□□□□□ -1.41
APOEP02649 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
APOEP02649 AC092651.1-201ENST00000426110 312 ntBASIC6.22□□□□□ -1.41
APOEP02649 GAPDHP34-201ENST00000432112 823 ntBASIC6.22□□□□□ -1.41
APOEP02649 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.22□□□□□ -1.41
APOEP02649 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.22□□□□□ -1.41
APOEP02649 ACA64.1-201ENST00000459171 127 ntBASIC6.22□□□□□ -1.41
APOEP02649 AC012123.2-201ENST00000485809 248 ntBASIC6.22□□□□□ -1.41
APOEP02649 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.22□□□□□ -1.41
APOEP02649 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.22□□□□□ -1.41
APOEP02649 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.22□□□□□ -1.41
APOEP02649 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
APOEP02649 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.22□□□□□ -1.41
APOEP02649 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
APOEP02649 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.22□□□□□ -1.41
APOEP02649 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
APOEP02649 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.22□□□□□ -1.41
APOEP02649 AC005726.4-201ENST00000582858 458 ntBASIC6.22□□□□□ -1.41
APOEP02649 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.22□□□□□ -1.41
APOEP02649 MIR6793-201ENST00000612376 63 ntBASIC6.22□□□□□ -1.41
APOEP02649 uc_338.26-201ENST00000612659 160 ntBASIC6.22□□□□□ -1.41
APOEP02649 AL021918.2-201ENST00000613415 194 ntBASIC6.22□□□□□ -1.41
APOEP02649 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.22□□□□□ -1.41
APOEP02649 MIR1910-201ENST00000636955 80 ntBASIC6.22□□□□□ -1.41
APOEP02649 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
APOEP02649 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
APOEP02649 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
APOEP02649 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
APOEP02649 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.22□□□□□ -1.41
APOEP02649 UGT2B24P-201ENST00000514441 1597 ntBASIC6.22□□□□□ -1.41
APOEP02649 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.22□□□□□ -1.41
APOEP02649 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
APOEP02649 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
APOEP02649 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
APOEP02649 AP001284.1-201ENST00000528393 2118 ntBASIC6.22□□□□□ -1.41
APOEP02649 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
APOEP02649 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.21□□□□□ -1.41
APOEP02649 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
APOEP02649 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
APOEP02649 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
APOEP02649 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
APOEP02649 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.21□□□□□ -1.41
APOEP02649 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
APOEP02649 WDR95P-201ENST00000425638 1542 ntBASIC6.21□□□□□ -1.42
APOEP02649 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
APOEP02649 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.21□□□□□ -1.42
APOEP02649 THAP12P9-201ENST00000503971 2360 ntBASIC6.21□□□□□ -1.42
APOEP02649 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
APOEP02649 RNU11-201ENST00000387069 134 ntBASIC6.21□□□□□ -1.42
APOEP02649 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.21□□□□□ -1.42
APOEP02649 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.21□□□□□ -1.42
APOEP02649 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
APOEP02649 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.21□□□□□ -1.42
APOEP02649 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.21□□□□□ -1.42
APOEP02649 KCTD9P1-201ENST00000430462 1167 ntBASIC6.21□□□□□ -1.42
APOEP02649 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
APOEP02649 GAPDHP75-201ENST00000433910 943 ntBASIC6.21□□□□□ -1.42
APOEP02649 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
APOEP02649 DNAJA1P5-201ENST00000440278 943 ntBASIC6.21□□□□□ -1.42
APOEP02649 EIF5AP4-201ENST00000441206 465 ntBASIC6.21□□□□□ -1.42
APOEP02649 BMS1P10-201ENST00000443754 1120 ntBASIC6.21□□□□□ -1.42
APOEP02649 AL162739.1-201ENST00000450606 307 ntBASIC6.21□□□□□ -1.42
APOEP02649 NDUFA5P5-201ENST00000468361 342 ntBASIC6.21□□□□□ -1.42
APOEP02649 AC094085.1-201ENST00000468914 584 ntBASIC6.21□□□□□ -1.42
APOEP02649 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.21□□□□□ -1.42
APOEP02649 AC008629.2-201ENST00000503783 483 ntBASIC6.21□□□□□ -1.42
APOEP02649 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.21□□□□□ -1.42
APOEP02649 OR5H7P-201ENST00000514084 930 ntBASIC6.21□□□□□ -1.42
APOEP02649 AC060775.1-201ENST00000518241 520 ntBASIC6.21□□□□□ -1.42
APOEP02649 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.21□□□□□ -1.42
APOEP02649 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.21□□□□□ -1.42
APOEP02649 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.21□□□□□ -1.42
APOEP02649 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.21□□□□□ -1.42
APOEP02649 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.21□□□□□ -1.42
APOEP02649 AL360012.1-201ENST00000602813 131 ntBASIC6.21□□□□□ -1.42
APOEP02649 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.21□□□□□ -1.42
APOEP02649 AL136131.3-201ENST00000607600 188 ntBASIC6.21□□□□□ -1.42
APOEP02649 AC016590.3-201ENST00000611171 753 ntBASIC6.21□□□□□ -1.42
APOEP02649 AC022400.9-201ENST00000623633 273 ntBASIC6.21□□□□□ -1.42
APOEP02649 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
APOEP02649 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
APOEP02649 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
APOEP02649 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.21□□□□□ -1.42
APOEP02649 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
APOEP02649 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
APOEP02649 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
APOEP02649 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
APOEP02649 BRAFP1-201ENST00000445336 2703 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms