Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 MTCO3P22-201ENST00000603219 784 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AC079880.2-201ENST00000603790 1213 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AL157392.4-201ENST00000609756 345 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AC079395.3-201ENST00000615161 484 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AC000095.2-202ENST00000637415 154 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC66A2RUB6 AL731532.1-201ENST00000623972 4236 ntBASIC7.03□□□□□ -1.28
CCDC66A2RUB6 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.02□□□□□ -1.28
CCDC66A2RUB6 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.02□□□□□ -1.28
CCDC66A2RUB6 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
CCDC66A2RUB6 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
CCDC66A2RUB6 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
CCDC66A2RUB6 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AC105749.1-201ENST00000631338 2008 ntBASIC7.02□□□□□ -1.29
CCDC66A2RUB6 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 RNU6-468P-201ENST00000384003 109 ntBASIC7.02□□□□□ -1.29
CCDC66A2RUB6 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 RNU6-298P-201ENST00000390888 96 ntBASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AC005005.2-201ENST00000420779 380 ntBASIC7.02□□□□□ -1.29
CCDC66A2RUB6 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 RPL23AP28-201ENST00000448062 470 ntBASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AC093166.2-201ENST00000455969 1017 ntBASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 RPS4XP19-201ENST00000460237 736 ntBASIC7.02□□□□□ -1.29
CCDC66A2RUB6 RPS17P11-201ENST00000474297 293 ntBASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AC008410.1-201ENST00000483777 339 ntBASIC7.02□□□□□ -1.29
CCDC66A2RUB6 EIF1P7-201ENST00000487533 337 ntBASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AC091515.1-201ENST00000548110 679 ntBASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 HMGN2P47-201ENST00000559378 272 ntBASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AL132640.1-201ENST00000559594 619 ntBASIC7.02□□□□□ -1.29
CCDC66A2RUB6 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AC011921.2-201ENST00000589465 152 ntBASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 BNIP3P24-201ENST00000593398 557 ntBASIC7.02□□□□□ -1.29
CCDC66A2RUB6 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 DUXAP3-201ENST00000603616 594 ntBASIC7.02□□□□□ -1.29
CCDC66A2RUB6 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AC022079.1-201ENST00000621546 602 ntBASIC7.02□□□□□ -1.29
CCDC66A2RUB6 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 OR5AC4P-202ENST00000642086 985 ntBASIC7.02□□□□□ -1.29
CCDC66A2RUB6 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC66A2RUB6 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
CCDC66A2RUB6 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
CCDC66A2RUB6 AC005261.2-201ENST00000593427 4258 ntBASIC7.01□□□□□ -1.29
CCDC66A2RUB6 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CCDC66A2RUB6 AL355488.2-201ENST00000609909 2850 ntBASIC7.01□□□□□ -1.29
CCDC66A2RUB6 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.01□□□□□ -1.29
CCDC66A2RUB6 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CCDC66A2RUB6 AC234772.1-201ENST00000377927 937 ntBASIC7.01□□□□□ -1.29
CCDC66A2RUB6 RNU1-46P-201ENST00000384425 164 ntBASIC7.01□□□□□ -1.29
CCDC66A2RUB6 RNA5SP474-201ENST00000391234 90 ntBASIC7.01□□□□□ -1.29
CCDC66A2RUB6 MTATP6P20-201ENST00000414147 562 ntBASIC7.01□□□□□ -1.29
CCDC66A2RUB6 TEX41-203ENST00000420472 765 ntTSL 3 BASIC7.01□□□□□ -1.29
CCDC66A2RUB6 AL359633.1-201ENST00000421403 310 ntBASIC7.01□□□□□ -1.29
CCDC66A2RUB6 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.01□□□□□ -1.29
CCDC66A2RUB6 AL354766.1-201ENST00000423396 542 ntBASIC7.01□□□□□ -1.29
CCDC66A2RUB6 RPL12P28-201ENST00000430852 489 ntBASIC7.01□□□□□ -1.29
CCDC66A2RUB6 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.01□□□□□ -1.29
CCDC66A2RUB6 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CCDC66A2RUB6 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC7.01□□□□□ -1.29
CCDC66A2RUB6 Z83846.1-201ENST00000446798 265 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms