Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 MTCO1P28-201ENST00000574177 1528 ntBASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC109446.4-201ENST00000623235 2755 ntBASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.37□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AP004607.3-201ENST00000530354 3915 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 MFSD8-219ENST00000641228 2559 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL133260.1-201ENST00000405720 405 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RNA5SP198-201ENST00000410376 127 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL158827.1-201ENST00000416300 391 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 NME1P1-201ENST00000420914 382 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RPSAP65-201ENST00000429660 595 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC023141.3-201ENST00000436698 278 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 TRIM60P16-201ENST00000444048 694 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL157777.1-201ENST00000468100 304 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 SEPT7P6-201ENST00000469999 1143 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 OR2A3P-201ENST00000493774 953 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 HMGN1P17-201ENST00000513734 295 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC111000.6-201ENST00000514471 709 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC097486.1-201ENST00000515331 210 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC138517.1-201ENST00000515724 568 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 NPIPB14P-203ENST00000532298 987 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC025423.2-201ENST00000537570 439 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC078878.1-201ENST00000539832 958 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC011270.1-201ENST00000558606 583 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 HMGN1P26-201ENST00000558737 303 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 MRPS21P8-201ENST00000569196 235 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 MIR4701-201ENST00000583094 63 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC073333.2-201ENST00000603589 769 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL049840.6-201ENST00000604583 345 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 HIRAP1-201ENST00000605318 787 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL021918.2-201ENST00000613415 194 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 MIR6737-201ENST00000617385 70 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 GNL2P1-201ENST00000451274 2190 ntBASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TRBV4-1A0A0J9YWV2 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 THAP12P8-201ENST00000447914 2115 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL592429.1-201ENST00000403909 1473 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms