Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 RNA5SP453-201ENST00000362503 119 ntBASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 AC099670.2-201ENST00000435130 321 ntBASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 PNKDP1-201ENST00000435914 430 ntBASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 DUTP1-201ENST00000493631 470 ntBASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 IGLV3-30-201ENST00000524362 298 ntBASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 AC091167.5-201ENST00000605689 894 ntBASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 AL035661.1-201ENST00000620459 1144 ntBASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 AL137058.3-201ENST00000624531 3099 ntBASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 CASC19-260ENST00000641828 2001 ntBASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 AL355488.2-201ENST00000609909 2850 ntBASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 AC117409.1-201ENST00000470499 1310 ntBASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRAV27A0A087WT01 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 RN7SKP171-201ENST00000364417 303 ntBASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 RNU1-136P-201ENST00000384181 164 ntBASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 RN7SKP29-201ENST00000410957 272 ntBASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 RNGTTP1-201ENST00000420965 728 ntBASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 ATP5LP2-201ENST00000440646 311 ntBASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AC128716.1-201ENST00000475129 166 ntBASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AC099521.1-201ENST00000482557 334 ntBASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 RPS7P6-201ENST00000485777 579 ntBASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AC021006.1-201ENST00000489849 553 ntBASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AC091874.2-201ENST00000505889 720 ntBASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 GAPDHP62-201ENST00000515313 990 ntBASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 RPA2P1-201ENST00000556557 721 ntBASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 MIR3154-201ENST00000577829 84 ntBASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AL136131.3-201ENST00000607600 188 ntBASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AC108673.3-201ENST00000609183 335 ntBASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AC015712.7-201ENST00000615211 635 ntBASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AC245014.3-201ENST00000618589 347 ntBASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AC093225.1-201ENST00000506867 1408 ntBASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 AF287957.1-201ENST00000607368 1595 ntBASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.2□□□□□ -1.58
TRAV27A0A087WT01 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms