Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 SEMA4D-207ENST00000420987 4275 ntTSL 5 BASIC8.37□□□□□ -1.07
LHX6Q9UPM6 CTNND2-205ENST00000503622 2982 ntTSL 2 BASIC8.37□□□□□ -1.07
LHX6Q9UPM6 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
LHX6Q9UPM6 OPTN-204ENST00000378752 3488 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LHX6Q9UPM6 DOCK8-202ENST00000382331 1922 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LHX6Q9UPM6 AC078881.1-201ENST00000507023 2161 ntTSL 2 BASIC8.37□□□□□ -1.07
LHX6Q9UPM6 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 CHODL-206ENST00000400135 2136 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AC106800.1-201ENST00000501221 1362 ntBASIC8.36□□□□□ -1.07
LHX6Q9UPM6 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 ASNSP3-201ENST00000451989 1306 ntBASIC8.36□□□□□ -1.07
LHX6Q9UPM6 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 ACTR3BP2-202ENST00000623630 1338 ntBASIC8.36□□□□□ -1.07
LHX6Q9UPM6 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 ERCC6-202ENST00000374127 1782 ntBASIC8.36□□□□□ -1.07
LHX6Q9UPM6 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 S100A13-201ENST00000339556 514 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 RNU1-21P-201ENST00000363327 163 ntBASIC8.36□□□□□ -1.07
LHX6Q9UPM6 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AL591416.1-201ENST00000404015 867 ntBASIC8.36□□□□□ -1.07
LHX6Q9UPM6 RN7SKP158-201ENST00000410453 326 ntBASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AL137014.1-201ENST00000420490 1226 ntBASIC8.36□□□□□ -1.07
LHX6Q9UPM6 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 HMGB3P10-201ENST00000434734 572 ntBASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AL353093.1-201ENST00000441292 436 ntBASIC8.36□□□□□ -1.07
LHX6Q9UPM6 MTND3P16-201ENST00000452205 344 ntBASIC8.36□□□□□ -1.07
LHX6Q9UPM6 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 RPL7P22-201ENST00000466005 733 ntBASIC8.36□□□□□ -1.07
LHX6Q9UPM6 RPS20P21-201ENST00000466859 343 ntBASIC8.36□□□□□ -1.07
LHX6Q9UPM6 RPL38P3-201ENST00000484463 213 ntBASIC8.36□□□□□ -1.07
LHX6Q9UPM6 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AC087269.1-201ENST00000522213 666 ntTSL 2 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AL133371.3-201ENST00000556197 549 ntTSL 4 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AC009171.1-201ENST00000572673 266 ntBASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 FP236315.1-201ENST00000623723 457 ntTSL 2 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 ABL2-206ENST00000504405 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 HELQ-204ENST00000510985 3315 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 LRRC49-203ENST00000443425 3085 ntTSL 2 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 NF1P8-201ENST00000415351 1461 ntBASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AP004289.2-201ENST00000444413 1457 ntBASIC8.36□□□□□ -1.07
LHX6Q9UPM6 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 SZRD1-210ENST00000492354 3401 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 SIMC1-201ENST00000332772 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 RNPC3-201ENST00000423855 1872 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 MCM3AP-AS1-201ENST00000414659 2539 ntTSL 2 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 PPP2R5C-201ENST00000328724 4045 ntTSL 2 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 GJB2-202ENST00000382848 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 AC013488.1-201ENST00000526618 1838 ntBASIC8.36□□□□□ -1.07
LHX6Q9UPM6 LINC02028-202ENST00000432154 2666 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 FIGNL1-211ENST00000611938 3543 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC8.36□□□□□ -1.07
LHX6Q9UPM6 EEF1A1P5-201ENST00000436459 1389 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 LRMP-205ENST00000548766 2193 ntAPPRIS P2 TSL 2 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 AC105342.1-201ENST00000378334 6848 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 HSPD1P5-201ENST00000511127 1720 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 MKL2-207ENST00000573051 1938 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 DZANK1-204ENST00000358866 3310 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 CELF2-215ENST00000636488 3908 ntTSL 5 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 AL354740.1-201ENST00000586726 2681 ntTSL 5 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 LINC01007-201ENST00000434537 2291 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 NFIA-212ENST00000485903 1674 ntTSL 5 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 C7orf55-LUC7L2-201ENST00000541515 1661 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms