Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC020763.5-201ENST00000623298 430 ntBASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPC1L1Q9UHC9 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 AC232271.1-201ENST00000602455 2715 ntBASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 AC140479.2-201ENST00000421567 3130 ntBASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 AC007842.1-201ENST00000597336 2039 ntBASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 RNA5SP394-201ENST00000364216 119 ntBASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 AL596448.1-201ENST00000415024 392 ntBASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 RPS4XP14-201ENST00000493072 781 ntBASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 AC090022.1-201ENST00000546569 311 ntBASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 AC127024.6-201ENST00000621598 424 ntBASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 NEPNP-201ENST00000404786 1371 ntBASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPC1L1Q9UHC9 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 HMGB1P20-201ENST00000402555 677 ntBASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 FIGN-202ENST00000409634 746 ntTSL 5 BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 BRWD1P3-201ENST00000428816 390 ntBASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 RPS27AP2-201ENST00000457576 465 ntBASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 RNU1-88P-201ENST00000459274 128 ntBASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 RPL32P33-201ENST00000487023 394 ntBASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 AC021678.3-201ENST00000517893 476 ntBASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 AC139697.1-201ENST00000548429 745 ntBASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPC1L1Q9UHC9 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 AL662795.2-201ENST00000624252 3706 ntBASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 ABCA11P-202ENST00000504019 2110 ntBASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 BMS1P13-201ENST00000417301 885 ntBASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 RN7SL284P-201ENST00000498823 275 ntBASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 AC002456.2-201ENST00000509356 380 ntBASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 SCARNA6.1-201ENST00000516989 238 ntBASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 AC087360.1-201ENST00000518788 616 ntBASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 AC027544.3-201ENST00000535082 757 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms