Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 CTAGE11P-201ENST00000451540 2353 ntBASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 RNU2-50P-201ENST00000410494 143 ntBASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 AL451062.2-201ENST00000427515 271 ntBASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 AC067931.1-201ENST00000624190 671 ntBASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 OR55B1P-203ENST00000641518 2602 ntBASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
RIMBP3Q9UFD9 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 AP003170.5-201ENST00000397185 335 ntBASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 AL050305.1-201ENST00000399993 1230 ntBASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 CCNB1IP1P2-201ENST00000432876 818 ntBASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 RHOT1P3-201ENST00000436571 331 ntBASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 SNORA16A-201ENST00000384342 137 ntBASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 NIFKP3-201ENST00000417799 865 ntBASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 AC234779.1-201ENST00000425910 285 ntBASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 LDHAP2-201ENST00000437325 985 ntBASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 AC092647.2-201ENST00000452998 253 ntBASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 AC019193.2-201ENST00000610012 634 ntBASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
RIMBP3Q9UFD9 AL034546.1-201ENST00000623740 3693 ntBASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 NRBF2P2-201ENST00000413087 861 ntBASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 OR2AM1P-201ENST00000422137 422 ntBASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 RPL38P3-201ENST00000484463 213 ntBASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 FLJ42393-201ENST00000623801 2270 ntBASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
RIMBP3Q9UFD9 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
RIMBP3Q9UFD9 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.97
RIMBP3Q9UFD9 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.96□□□□□ -0.97
RIMBP3Q9UFD9 PRICKLE2-204ENST00000564377 8032 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.97
RIMBP3Q9UFD9 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
RIMBP3Q9UFD9 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
RIMBP3Q9UFD9 MIR130A-201ENST00000385274 89 ntBASIC8.96□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms