Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RPL7P16-201ENST00000479738 738 ntBASIC5.84□□□□□ -1.47
CHD7Q9P2D1 OR7H2P-201ENST00000513483 306 ntBASIC5.84□□□□□ -1.47
CHD7Q9P2D1 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 AC136624.4-201ENST00000573044 370 ntBASIC5.84□□□□□ -1.47
CHD7Q9P2D1 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 MYO15A-217ENST00000615845 11860 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 PSD4-205ENST00000441564 11234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 GABRB3-204ENST00000541819 5934 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 AC107980.1-201ENST00000558671 3355 ntBASIC5.84□□□□□ -1.47
CHD7Q9P2D1 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHD7Q9P2D1 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
CHD7Q9P2D1 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.84□□□□□ -1.48
CHD7Q9P2D1 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CHD7Q9P2D1 AC245028.1-201ENST00000423259 256 ntBASIC5.84□□□□□ -1.48
CHD7Q9P2D1 LDHAP2-201ENST00000437325 985 ntBASIC5.84□□□□□ -1.48
CHD7Q9P2D1 DNAJA1P6-201ENST00000437347 354 ntBASIC5.84□□□□□ -1.48
CHD7Q9P2D1 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CHD7Q9P2D1 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.84□□□□□ -1.48
CHD7Q9P2D1 AC002075.1-201ENST00000457396 676 ntBASIC5.84□□□□□ -1.48
CHD7Q9P2D1 CYP4F27P-201ENST00000514557 494 ntBASIC5.84□□□□□ -1.48
CHD7Q9P2D1 AC010435.1-201ENST00000623353 1177 ntBASIC5.84□□□□□ -1.48
CHD7Q9P2D1 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.84□□□□□ -1.48
CHD7Q9P2D1 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
CHD7Q9P2D1 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.84□□□□□ -1.48
CHD7Q9P2D1 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.84□□□□□ -1.48
CHD7Q9P2D1 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.84□□□□□ -1.48
CHD7Q9P2D1 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 PPIP5K1-201ENST00000334933 5586 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 PRDM10-201ENST00000304538 5817 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 RSL1D1-204ENST00000571133 5483 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 AC005261.2-201ENST00000593427 4258 ntBASIC5.83□□□□□ -1.48
CHD7Q9P2D1 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 RNU1-149P-201ENST00000390870 161 ntBASIC5.83□□□□□ -1.48
CHD7Q9P2D1 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 ZNF733P-202ENST00000444809 1573 ntBASIC5.83□□□□□ -1.48
CHD7Q9P2D1 TRY2P-201ENST00000448860 689 ntBASIC5.83□□□□□ -1.48
CHD7Q9P2D1 AC073264.2-201ENST00000448886 166 ntBASIC5.83□□□□□ -1.48
CHD7Q9P2D1 HMGB1P44-201ENST00000508597 572 ntBASIC5.83□□□□□ -1.48
CHD7Q9P2D1 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 AC090607.5-201ENST00000615692 224 ntBASIC5.83□□□□□ -1.48
CHD7Q9P2D1 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 TENM2-207ENST00000520394 8034 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 KIRREL1-203ENST00000368172 6870 ntTSL 2 BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHD7Q9P2D1 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 PRPF38AP2-201ENST00000438179 851 ntBASIC5.82□□□□□ -1.48
CHD7Q9P2D1 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 RN7SL352P-201ENST00000466002 277 ntBASIC5.82□□□□□ -1.48
CHD7Q9P2D1 SNORA70.11-201ENST00000515987 138 ntBASIC5.82□□□□□ -1.48
CHD7Q9P2D1 SNORA70.13-201ENST00000516116 138 ntBASIC5.82□□□□□ -1.48
CHD7Q9P2D1 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms