Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 AL161901.1-201ENST00000624954 3425 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LRFN1Q9P244 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LRFN1Q9P244 SNORD35A-201ENST00000363389 86 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LRFN1Q9P244 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 AC104297.1-201ENST00000393779 870 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 AC003045.1-201ENST00000398779 713 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 RNU4-27P-201ENST00000410889 139 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 AL158050.1-201ENST00000416077 457 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 NIFKP3-201ENST00000417799 865 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LRFN1Q9P244 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 AC008753.1-201ENST00000423096 284 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 AC083862.1-201ENST00000427378 1242 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 AL389925.1-201ENST00000432257 728 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LRFN1Q9P244 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 GXYLT1P1-201ENST00000446657 490 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LRFN1Q9P244 AC144530.1-201ENST00000452862 555 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 RN7SL552P-201ENST00000462094 276 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 RPL5P14-201ENST00000494197 878 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 RN7SL362P-201ENST00000494228 267 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LRFN1Q9P244 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 CYCSP25-201ENST00000525280 316 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 C1DP5-201ENST00000525775 383 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LRFN1Q9P244 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
LRFN1Q9P244 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 AC125612.1-201ENST00000547580 377 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 AC026898.1-201ENST00000586404 571 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 AL139022.2-201ENST00000606934 443 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 AL352984.2-201ENST00000611153 546 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 MIR6721-201ENST00000617181 87 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 AL138955.1-201ENST00000622881 1040 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 AC068880.4-201ENST00000623082 495 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 AC007683.2-201ENST00000624681 714 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LRFN1Q9P244 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LRFN1Q9P244 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 AL139384.2-201ENST00000613809 3590 ntBASIC5.99□□□□□ -1.45
LRFN1Q9P244 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
LRFN1Q9P244 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LRFN1Q9P244 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRFN1Q9P244 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRFN1Q9P244 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LRFN1Q9P244 AC008957.3-201ENST00000624112 2242 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRFN1Q9P244 AC083899.2-201ENST00000423285 1376 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LRFN1Q9P244 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LRFN1Q9P244 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRFN1Q9P244 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 OR7E156P-201ENST00000400303 464 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 AL445213.1-201ENST00000412589 747 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRFN1Q9P244 MTCO2P1-201ENST00000424648 477 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 EIF5AP4-201ENST00000441206 465 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 HMGB1P5-202ENST00000451497 985 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 CLIC4P1-201ENST00000453177 535 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 RARRES2P3-201ENST00000457739 473 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.98□□□□□ -1.45
LRFN1Q9P244 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LRFN1Q9P244 RN7SL561P-201ENST00000488553 281 ntBASIC5.98□□□□□ -1.45
LRFN1Q9P244 AC112198.4-201ENST00000515450 351 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms