Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC119403.2-201ENST00000590960 598 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC6.85□□□□□ -1.31
COL20A1Q9P218 AC040174.2-201ENST00000602701 465 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 AL031601.1-201ENST00000605702 394 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.85□□□□□ -1.31
COL20A1Q9P218 PCA3_2.1-201ENST00000612507 409 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL20A1Q9P218 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.85□□□□□ -1.31
COL20A1Q9P218 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL20A1Q9P218 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL20A1Q9P218 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL20A1Q9P218 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
COL20A1Q9P218 EPS15P1-202ENST00000459691 2071 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL20A1Q9P218 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.84□□□□□ -1.31
COL20A1Q9P218 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.31
COL20A1Q9P218 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.84□□□□□ -1.31
COL20A1Q9P218 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL20A1Q9P218 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.84□□□□□ -1.31
COL20A1Q9P218 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.84□□□□□ -1.31
COL20A1Q9P218 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL20A1Q9P218 AC087752.1-201ENST00000391360 558 ntBASIC6.84□□□□□ -1.31
COL20A1Q9P218 UBE2V1P15-201ENST00000407776 448 ntBASIC6.84□□□□□ -1.31
COL20A1Q9P218 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.84□□□□□ -1.31
COL20A1Q9P218 AC245060.4-201ENST00000413293 1121 ntBASIC6.84□□□□□ -1.31
COL20A1Q9P218 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.84□□□□□ -1.31
COL20A1Q9P218 NMD3P2-201ENST00000421815 761 ntBASIC6.84□□□□□ -1.31
COL20A1Q9P218 AL035660.1-201ENST00000422041 222 ntBASIC6.84□□□□□ -1.31
COL20A1Q9P218 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.84□□□□□ -1.31
COL20A1Q9P218 MTND5P8-201ENST00000449817 1083 ntBASIC6.84□□□□□ -1.31
COL20A1Q9P218 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.84□□□□□ -1.31
COL20A1Q9P218 AL353718.1-201ENST00000451028 517 ntBASIC6.84□□□□□ -1.31
COL20A1Q9P218 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.84□□□□□ -1.31
COL20A1Q9P218 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC6.84□□□□□ -1.31
COL20A1Q9P218 OR9N1P-201ENST00000491296 333 ntBASIC6.84□□□□□ -1.31
COL20A1Q9P218 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.84□□□□□ -1.31
COL20A1Q9P218 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.84□□□□□ -1.31
COL20A1Q9P218 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.84□□□□□ -1.31
COL20A1Q9P218 AC087360.1-201ENST00000518788 616 ntBASIC6.84□□□□□ -1.31
COL20A1Q9P218 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.84□□□□□ -1.31
COL20A1Q9P218 WBP1LP3-201ENST00000523033 208 ntBASIC6.84□□□□□ -1.31
COL20A1Q9P218 OR56A7P-201ENST00000524865 941 ntBASIC6.84□□□□□ -1.31
COL20A1Q9P218 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.84□□□□□ -1.31
COL20A1Q9P218 AL356801.1-201ENST00000559320 294 ntBASIC6.84□□□□□ -1.31
COL20A1Q9P218 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.84□□□□□ -1.31
COL20A1Q9P218 AC107993.1-201ENST00000591343 684 ntBASIC6.84□□□□□ -1.31
COL20A1Q9P218 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.84□□□□□ -1.31
COL20A1Q9P218 AC098483.2-201ENST00000603158 454 ntBASIC6.84□□□□□ -1.31
COL20A1Q9P218 CYCSP1-201ENST00000604815 315 ntBASIC6.84□□□□□ -1.31
COL20A1Q9P218 AC105148.1-201ENST00000604961 409 ntBASIC6.84□□□□□ -1.31
COL20A1Q9P218 AP000240.1-201ENST00000609910 452 ntBASIC6.84□□□□□ -1.31
COL20A1Q9P218 uc_338.26-201ENST00000612659 160 ntBASIC6.84□□□□□ -1.31
COL20A1Q9P218 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.84□□□□□ -1.31
COL20A1Q9P218 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.84□□□□□ -1.31
COL20A1Q9P218 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL20A1Q9P218 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
COL20A1Q9P218 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
COL20A1Q9P218 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL20A1Q9P218 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL20A1Q9P218 AC119674.1-213ENST00000641177 1386 ntBASIC6.83□□□□□ -1.32
COL20A1Q9P218 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL20A1Q9P218 FUNDC2P3-201ENST00000334716 533 ntBASIC6.83□□□□□ -1.32
COL20A1Q9P218 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 AC007562.1-201ENST00000421819 517 ntBASIC6.83□□□□□ -1.32
COL20A1Q9P218 RCC2P2-201ENST00000422174 918 ntBASIC6.83□□□□□ -1.32
COL20A1Q9P218 CHEK2P5-201ENST00000423877 246 ntBASIC6.83□□□□□ -1.32
COL20A1Q9P218 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 SUMO2P3-201ENST00000438311 288 ntBASIC6.83□□□□□ -1.32
COL20A1Q9P218 AC023274.2-201ENST00000445264 521 ntBASIC6.83□□□□□ -1.32
COL20A1Q9P218 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL20A1Q9P218 RPL23AP60-201ENST00000450011 454 ntBASIC6.83□□□□□ -1.32
COL20A1Q9P218 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 AC096754.1-201ENST00000508904 818 ntBASIC6.83□□□□□ -1.32
COL20A1Q9P218 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL20A1Q9P218 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL20A1Q9P218 OR4H6P-202ENST00000603819 340 ntBASIC6.83□□□□□ -1.32
COL20A1Q9P218 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL20A1Q9P218 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 AC139426.3-201ENST00000605648 2059 ntBASIC6.83□□□□□ -1.32
COL20A1Q9P218 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
COL20A1Q9P218 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms