Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM4Q9C037 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM4Q9C037 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM4Q9C037 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM4Q9C037 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 PARP4P2-201ENST00000446672 3326 ntBASIC6.14□□□□□ -1.43
TRIM4Q9C037 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM4Q9C037 AC005261.2-201ENST00000593427 4258 ntBASIC6.13□□□□□ -1.43
TRIM4Q9C037 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM4Q9C037 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM4Q9C037 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM4Q9C037 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM4Q9C037 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM4Q9C037 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 AC023490.2-201ENST00000359859 470 ntBASIC6.13□□□□□ -1.43
TRIM4Q9C037 AL050335.1-201ENST00000396909 869 ntBASIC6.13□□□□□ -1.43
TRIM4Q9C037 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 RNA5SP198-201ENST00000410376 127 ntBASIC6.13□□□□□ -1.43
TRIM4Q9C037 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM4Q9C037 RPL23AP85-201ENST00000421838 433 ntBASIC6.13□□□□□ -1.43
TRIM4Q9C037 BX510359.3-201ENST00000422168 306 ntBASIC6.13□□□□□ -1.43
TRIM4Q9C037 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 AL365220.1-201ENST00000432923 399 ntBASIC6.13□□□□□ -1.43
TRIM4Q9C037 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 RPL31P15-201ENST00000449770 338 ntBASIC6.13□□□□□ -1.43
TRIM4Q9C037 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 AC009963.3-201ENST00000458090 486 ntBASIC6.13□□□□□ -1.43
TRIM4Q9C037 NXT1P1-201ENST00000458481 316 ntBASIC6.13□□□□□ -1.43
TRIM4Q9C037 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM4Q9C037 AC008638.1-201ENST00000506035 866 ntBASIC6.13□□□□□ -1.43
TRIM4Q9C037 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 ZNF519P4-201ENST00000514008 125 ntBASIC6.13□□□□□ -1.43
TRIM4Q9C037 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 RPL41P2-201ENST00000544920 409 ntBASIC6.13□□□□□ -1.43
TRIM4Q9C037 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM4Q9C037 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 AC010503.3-201ENST00000594355 540 ntBASIC6.13□□□□□ -1.43
TRIM4Q9C037 AL589863.1-201ENST00000595383 631 ntBASIC6.13□□□□□ -1.43
TRIM4Q9C037 RPSAP75-201ENST00000605848 301 ntBASIC6.13□□□□□ -1.43
TRIM4Q9C037 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 AL445649.1-201ENST00000615941 691 ntBASIC6.13□□□□□ -1.43
TRIM4Q9C037 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM4Q9C037 AL157831.2-201ENST00000564681 3095 ntBASIC6.13□□□□□ -1.43
TRIM4Q9C037 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM4Q9C037 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM4Q9C037 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM4Q9C037 HSPA8P14-201ENST00000552265 1805 ntBASIC6.13□□□□□ -1.43
TRIM4Q9C037 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM4Q9C037 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM4Q9C037 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM4Q9C037 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.13□□□□□ -1.43
TRIM4Q9C037 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
TRIM4Q9C037 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM4Q9C037 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM4Q9C037 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
TRIM4Q9C037 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
TRIM4Q9C037 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM4Q9C037 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.12□□□□□ -1.43
TRIM4Q9C037 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
TRIM4Q9C037 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM4Q9C037 SNORA5.1-201ENST00000384275 131 ntBASIC6.12□□□□□ -1.43
TRIM4Q9C037 RANP6-201ENST00000413691 644 ntBASIC6.12□□□□□ -1.43
TRIM4Q9C037 AC017078.1-201ENST00000416146 368 ntBASIC6.12□□□□□ -1.43
TRIM4Q9C037 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM4Q9C037 RPSAP65-201ENST00000429660 595 ntBASIC6.12□□□□□ -1.43
TRIM4Q9C037 OR52I1-201ENST00000450052 1050 ntBASIC6.12□□□□□ -1.43
TRIM4Q9C037 SBDSP1-204ENST00000453858 737 ntBASIC6.12□□□□□ -1.43
TRIM4Q9C037 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM4Q9C037 AL445687.2-201ENST00000458156 728 ntBASIC6.12□□□□□ -1.43
TRIM4Q9C037 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.12□□□□□ -1.43
TRIM4Q9C037 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
TRIM4Q9C037 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM4Q9C037 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM4Q9C037 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM4Q9C037 AP006245.2-201ENST00000522004 300 ntBASIC6.12□□□□□ -1.43
TRIM4Q9C037 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
TRIM4Q9C037 AC005632.2-201ENST00000564271 828 ntBASIC6.12□□□□□ -1.43
TRIM4Q9C037 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM4Q9C037 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM4Q9C037 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM4Q9C037 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms