Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL365220.1-201ENST00000432923 399 ntBASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 RPL12P11-201ENST00000439970 501 ntBASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 AP006222.1-205ENST00000450734 457 ntBASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 RPS17P15-201ENST00000475609 349 ntBASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 AP003789.1-201ENST00000617737 605 ntBASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 AC016542.2-201ENST00000624201 619 ntBASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 SNX18P12-201ENST00000624821 759 ntBASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 OR11H2-202ENST00000641517 1085 ntBASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 AC005224.3-201ENST00000584683 2140 ntBASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 RPL23AP17-201ENST00000401064 499 ntBASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 RN7SKP29-201ENST00000410957 272 ntBASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 RPS3P2-201ENST00000421346 701 ntBASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 IPPKP1-201ENST00000422501 768 ntBASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 SETP9-201ENST00000423837 832 ntBASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 AC093166.4-201ENST00000457867 318 ntBASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 TOMM22P4-201ENST00000511318 336 ntBASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 RN7SKP248-201ENST00000516278 305 ntBASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 AP003080.1-202ENST00000526526 915 ntBASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 AP001804.1-201ENST00000526868 919 ntBASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 AC022919.1-201ENST00000624979 626 ntBASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 OR8G3P-202ENST00000641572 1255 ntBASIC5.9□□□□□ -1.46
ECHDC3Q96DC8 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ECHDC3Q96DC8 AL078595.2-201ENST00000605309 1780 ntBASIC5.9□□□□□ -1.47
ECHDC3Q96DC8 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.9□□□□□ -1.47
ECHDC3Q96DC8 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.9□□□□□ -1.47
ECHDC3Q96DC8 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.47
ECHDC3Q96DC8 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AC091305.2-201ENST00000624049 1576 ntBASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AP004289.1-201ENST00000436307 2205 ntBASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 SNORD1C-201ENST00000363315 78 ntBASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 RPS3AP2-201ENST00000407190 754 ntBASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 MRPL53P1-201ENST00000414323 319 ntBASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 RPL23AP19-201ENST00000436229 369 ntBASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AL390879.1-201ENST00000439143 386 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms