Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 IGHV4-55-201ENST00000520889 368 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 OR9G2P-201ENST00000533326 880 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTP4A1Q93096 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 AC019322.1-201ENST00000571869 389 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 AC019131.2-201ENST00000609071 870 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTP4A1Q93096 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 OR7E91P-202ENST00000642062 1198 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTP4A1Q93096 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTP4A1Q93096 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTP4A1Q93096 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.58□□□□□ -1.52
PTP4A1Q93096 AC217777.1-201ENST00000570034 1471 ntBASIC5.58□□□□□ -1.52
PTP4A1Q93096 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTP4A1Q93096 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTP4A1Q93096 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 AC114876.1-201ENST00000490962 1366 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTP4A1Q93096 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTP4A1Q93096 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTP4A1Q93096 RNU1-146P-201ENST00000364015 165 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTP4A1Q93096 VIM2P-201ENST00000402383 1294 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 RN7SKP221-201ENST00000410420 301 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 UBTFL2-201ENST00000411859 1191 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 OR51A6P-201ENST00000418680 1004 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 AL354766.1-201ENST00000423396 542 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 SETP10-201ENST00000424368 814 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 RPS7P14-201ENST00000426405 583 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 VTI1BP4-201ENST00000427516 527 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 AL356121.1-201ENST00000442911 156 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 RN7SL643P-201ENST00000471845 291 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 MTND3P6-201ENST00000485242 339 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 AC093664.1-201ENST00000511779 289 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 AC009268.1-201ENST00000561352 1203 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 MIR5010-201ENST00000582846 120 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 MIR212-201ENST00000586026 110 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 AC020916.2-201ENST00000591242 360 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 AC004890.3-201ENST00000605566 1095 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 AC005899.6-201ENST00000620729 297 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 AC211486.4-201ENST00000621495 113 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 AL138693.1-201ENST00000622219 129 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTP4A1Q93096 CASC19-281ENST00000642118 1554 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 MAPK10-338ENST00000641647 3362 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTP4A1Q93096 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
PTP4A1Q93096 AL359091.1-201ENST00000449048 1734 ntBASIC5.57□□□□□ -1.52
PTP4A1Q93096 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
PTP4A1Q93096 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.56□□□□□ -1.52
PTP4A1Q93096 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.56□□□□□ -1.52
PTP4A1Q93096 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTP4A1Q93096 AC006484.1-201ENST00000435086 1884 ntBASIC5.56□□□□□ -1.52
PTP4A1Q93096 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTP4A1Q93096 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTP4A1Q93096 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.56□□□□□ -1.52
PTP4A1Q93096 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTP4A1Q93096 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTP4A1Q93096 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PTP4A1Q93096 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
PTP4A1Q93096 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.56□□□□□ -1.52
PTP4A1Q93096 RNU6-670P-201ENST00000364312 104 ntBASIC5.56□□□□□ -1.52
PTP4A1Q93096 RNA5SP85-201ENST00000365378 119 ntBASIC5.56□□□□□ -1.52
PTP4A1Q93096 YWHAZP4-201ENST00000392459 708 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms