Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 AC092865.1-201ENST00000544395 1023 ntBASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 AC016839.1-201ENST00000578162 867 ntBASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 AC011500.1-201ENST00000601963 469 ntBASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 SMIM12P1-201ENST00000603004 274 ntBASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 AP001153.1-201ENST00000641024 338 ntBASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 AC020633.1-201ENST00000468439 2247 ntBASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 EIF3EP1-201ENST00000433978 1316 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 AL359976.1-201ENST00000418655 3528 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 AC003985.2-201ENST00000562268 1669 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 MIR7-1-201ENST00000384871 110 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 RPL23AP17-201ENST00000401064 499 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 RPSAP65-201ENST00000429660 595 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 GAPDHP59-201ENST00000435908 267 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 XKRYP6-201ENST00000440468 1116 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 XKRYP3-201ENST00000442113 1116 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 RPL31P20-201ENST00000449593 360 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 RPL23AP60-201ENST00000450011 454 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 OR11I1P-201ENST00000486033 954 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 RPL9P15-201ENST00000491096 532 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 RN7SL568P-201ENST00000493069 298 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 AC090958.1-201ENST00000511122 351 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 HMGN1P17-201ENST00000513734 295 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 AC078878.1-201ENST00000539832 958 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 AC009268.1-201ENST00000561352 1203 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 AC027281.1-201ENST00000574178 758 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 AP005136.2-201ENST00000583253 1049 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 AP001823.1-201ENST00000604056 1003 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 BNIP3P7-201ENST00000605641 516 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 RPSAP75-201ENST00000605848 301 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 AC100814.1-201ENST00000606963 623 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 AL135999.3-201ENST00000610501 812 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 RN7SL261P-201ENST00000613441 282 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 AC022325.1-201ENST00000502748 2199 ntBASIC5.48□□□□□ -1.53
NHLRC1Q6VVB1 AC107021.2-201ENST00000567714 2095 ntBASIC5.47□□□□□ -1.53
NHLRC1Q6VVB1 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NHLRC1Q6VVB1 AL121768.1-201ENST00000613917 2544 ntBASIC5.47□□□□□ -1.53
NHLRC1Q6VVB1 AL034546.1-201ENST00000623740 3693 ntBASIC5.47□□□□□ -1.53
NHLRC1Q6VVB1 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NHLRC1Q6VVB1 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.47□□□□□ -1.53
NHLRC1Q6VVB1 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.47□□□□□ -1.53
NHLRC1Q6VVB1 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
NHLRC1Q6VVB1 RN7SKP250-201ENST00000363924 321 ntBASIC5.47□□□□□ -1.53
NHLRC1Q6VVB1 RNU6-729P-201ENST00000384399 107 ntBASIC5.47□□□□□ -1.53
NHLRC1Q6VVB1 MIR188-201ENST00000385034 86 ntBASIC5.47□□□□□ -1.53
NHLRC1Q6VVB1 RNU11-201ENST00000387069 134 ntBASIC5.47□□□□□ -1.53
NHLRC1Q6VVB1 CXADRP1-201ENST00000398098 1095 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms