Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC073109.1-201ENST00000445066 978 ntBASIC7.12□□□□□ -1.27
CTR9Q6PD62 SDC4P-201ENST00000453285 601 ntBASIC7.12□□□□□ -1.27
CTR9Q6PD62 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.12□□□□□ -1.27
CTR9Q6PD62 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.12□□□□□ -1.27
CTR9Q6PD62 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.12□□□□□ -1.27
CTR9Q6PD62 SETP21-201ENST00000514799 892 ntBASIC7.12□□□□□ -1.27
CTR9Q6PD62 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.12□□□□□ -1.27
CTR9Q6PD62 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.12□□□□□ -1.27
CTR9Q6PD62 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.12□□□□□ -1.27
CTR9Q6PD62 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.12□□□□□ -1.27
CTR9Q6PD62 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.12□□□□□ -1.27
CTR9Q6PD62 AC100767.2-201ENST00000604840 693 ntBASIC7.12□□□□□ -1.27
CTR9Q6PD62 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.12□□□□□ -1.27
CTR9Q6PD62 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.12□□□□□ -1.27
CTR9Q6PD62 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.12□□□□□ -1.27
CTR9Q6PD62 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.12□□□□□ -1.27
CTR9Q6PD62 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.12□□□□□ -1.27
CTR9Q6PD62 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CTR9Q6PD62 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.12□□□□□ -1.27
CTR9Q6PD62 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CTR9Q6PD62 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CTR9Q6PD62 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CTR9Q6PD62 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC7.12□□□□□ -1.27
CTR9Q6PD62 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CTR9Q6PD62 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CTR9Q6PD62 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
CTR9Q6PD62 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
CTR9Q6PD62 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.12□□□□□ -1.27
CTR9Q6PD62 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CTR9Q6PD62 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CTR9Q6PD62 AC027088.4-201ENST00000611559 1947 ntBASIC7.11□□□□□ -1.27
CTR9Q6PD62 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 AL049634.1-201ENST00000453770 1720 ntBASIC7.11□□□□□ -1.27
CTR9Q6PD62 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.11□□□□□ -1.27
CTR9Q6PD62 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.11□□□□□ -1.27
CTR9Q6PD62 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.11□□□□□ -1.27
CTR9Q6PD62 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 RPS7P3-201ENST00000443360 580 ntBASIC7.11□□□□□ -1.27
CTR9Q6PD62 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CTR9Q6PD62 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CTR9Q6PD62 RPL23AP40-201ENST00000487630 390 ntBASIC7.11□□□□□ -1.27
CTR9Q6PD62 AC008629.2-201ENST00000503783 483 ntBASIC7.11□□□□□ -1.27
CTR9Q6PD62 CYP4F27P-201ENST00000514557 494 ntBASIC7.11□□□□□ -1.27
CTR9Q6PD62 WBP1LP3-201ENST00000523033 208 ntBASIC7.11□□□□□ -1.27
CTR9Q6PD62 IGKV2-4-201ENST00000523070 340 ntBASIC7.11□□□□□ -1.27
CTR9Q6PD62 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 uc_338.26-201ENST00000612659 160 ntBASIC7.11□□□□□ -1.27
CTR9Q6PD62 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CTR9Q6PD62 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CTR9Q6PD62 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CTR9Q6PD62 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CTR9Q6PD62 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CTR9Q6PD62 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CTR9Q6PD62 AC006600.2-201ENST00000624834 2506 ntBASIC7.1□□□□□ -1.27
CTR9Q6PD62 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CTR9Q6PD62 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTR9Q6PD62 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTR9Q6PD62 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CTR9Q6PD62 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CTR9Q6PD62 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTR9Q6PD62 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CTR9Q6PD62 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTR9Q6PD62 PEX12P1-201ENST00000400284 1048 ntBASIC7.1□□□□□ -1.27
CTR9Q6PD62 HMGA1P8-201ENST00000414130 321 ntBASIC7.1□□□□□ -1.27
CTR9Q6PD62 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.1□□□□□ -1.27
CTR9Q6PD62 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.1□□□□□ -1.27
CTR9Q6PD62 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTR9Q6PD62 TUBB4BP6-201ENST00000437576 479 ntBASIC7.1□□□□□ -1.27
CTR9Q6PD62 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
CTR9Q6PD62 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.1□□□□□ -1.27
CTR9Q6PD62 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.1□□□□□ -1.27
CTR9Q6PD62 ACA64.1-201ENST00000459171 127 ntBASIC7.1□□□□□ -1.27
CTR9Q6PD62 AC011476.1-201ENST00000466725 307 ntBASIC7.1□□□□□ -1.27
CTR9Q6PD62 AL122020.1-201ENST00000472287 459 ntBASIC7.1□□□□□ -1.27
CTR9Q6PD62 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.1□□□□□ -1.27
CTR9Q6PD62 CCDC11P1-201ENST00000503137 1162 ntBASIC7.1□□□□□ -1.27
CTR9Q6PD62 OR7E158P-201ENST00000524483 910 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms