Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.86□□□□□ -1.63
SSBP1Q04837 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSBP1Q04837 FANCD2P2-201ENST00000437591 1400 ntBASIC4.86□□□□□ -1.63
SSBP1Q04837 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSBP1Q04837 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSBP1Q04837 AC004023.1-201ENST00000561473 1744 ntBASIC4.86□□□□□ -1.63
SSBP1Q04837 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSBP1Q04837 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSBP1Q04837 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSBP1Q04837 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSBP1Q04837 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSBP1Q04837 AC023632.6-201ENST00000624338 2177 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SSBP1Q04837 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSBP1Q04837 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.85□□□□□ -1.63
SSBP1Q04837 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSBP1Q04837 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.85□□□□□ -1.63
SSBP1Q04837 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSBP1Q04837 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SSBP1Q04837 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSBP1Q04837 RNA5SP429-201ENST00000363688 109 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 SNRPEP6-201ENST00000407465 277 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 RN7SKP117-201ENST00000410175 264 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 AC068138.1-201ENST00000412635 217 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.85□□□□□ -1.63
SSBP1Q04837 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.85□□□□□ -1.63
SSBP1Q04837 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSBP1Q04837 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC4.85□□□□□ -1.63
SSBP1Q04837 AP003385.1-201ENST00000426387 893 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SSBP1Q04837 DEFA9P-201ENST00000433042 285 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC4.85□□□□□ -1.63
SSBP1Q04837 AC234771.2-201ENST00000445718 597 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 FTLP8-201ENST00000446770 267 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 RPS18P1-201ENST00000447840 458 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 OR52I1-201ENST00000450052 1050 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 RPS10P28-201ENST00000480396 498 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 AC016559.2-201ENST00000510759 359 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC4.85□□□□□ -1.63
SSBP1Q04837 IGKV1D-32-201ENST00000517449 318 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.85□□□□□ -1.63
SSBP1Q04837 IGHVII-49-1-201ENST00000521760 224 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 AC084851.2-201ENST00000530377 364 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 OR9G2P-201ENST00000533326 880 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 SLC25A51P2-201ENST00000535708 889 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 DPPA3P2-202ENST00000557188 1219 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 AC040958.1-201ENST00000561102 201 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.85□□□□□ -1.63
SSBP1Q04837 MRPS21P8-201ENST00000569196 235 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSBP1Q04837 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.85□□□□□ -1.63
SSBP1Q04837 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.85□□□□□ -1.63
SSBP1Q04837 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.85□□□□□ -1.63
SSBP1Q04837 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.85□□□□□ -1.63
SSBP1Q04837 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.85□□□□□ -1.63
SSBP1Q04837 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
SSBP1Q04837 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
SSBP1Q04837 RBPJP7-201ENST00000442803 1447 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 RBPJP5-201ENST00000449433 1447 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.85□□□□□ -1.63
SSBP1Q04837 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.85□□□□□ -1.63
SSBP1Q04837 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSBP1Q04837 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSBP1Q04837 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.85□□□□□ -1.63
SSBP1Q04837 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSBP1Q04837 AC125336.1-201ENST00000508893 2827 ntBASIC4.85□□□□□ -1.63
SSBP1Q04837 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSBP1Q04837 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSBP1Q04837 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.84□□□□□ -1.63
SSBP1Q04837 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.84□□□□□ -1.63
SSBP1Q04837 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSBP1Q04837 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SSBP1Q04837 AC010266.2-201ENST00000564741 3255 ntBASIC4.84□□□□□ -1.63
SSBP1Q04837 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSBP1Q04837 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
SSBP1Q04837 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSBP1Q04837 AL359715.3-201ENST00000569267 2123 ntBASIC4.84□□□□□ -1.63
SSBP1Q04837 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSBP1Q04837 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSBP1Q04837 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSBP1Q04837 LINC01808-203ENST00000641932 1643 ntBASIC4.84□□□□□ -1.63
SSBP1Q04837 MTCO1P28-201ENST00000574177 1528 ntBASIC4.84□□□□□ -1.63
SSBP1Q04837 AL049869.1-201ENST00000556933 1402 ntBASIC4.84□□□□□ -1.63
SSBP1Q04837 AC022417.1-201ENST00000624768 1303 ntBASIC4.84□□□□□ -1.63
SSBP1Q04837 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SSBP1Q04837 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSBP1Q04837 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SSBP1Q04837 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSBP1Q04837 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.84□□□□□ -1.63
SSBP1Q04837 MIR188-201ENST00000385034 86 ntBASIC4.84□□□□□ -1.63
SSBP1Q04837 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.84□□□□□ -1.63
SSBP1Q04837 MTND2P12-201ENST00000417560 1252 ntBASIC4.84□□□□□ -1.63
SSBP1Q04837 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC4.84□□□□□ -1.63
SSBP1Q04837 HSPD1P12-201ENST00000429127 1069 ntBASIC4.84□□□□□ -1.63
SSBP1Q04837 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSBP1Q04837 NANOGP9-201ENST00000439890 892 ntBASIC4.84□□□□□ -1.63
SSBP1Q04837 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.84□□□□□ -1.63
SSBP1Q04837 AL590004.3-202ENST00000445883 451 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms