Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.88□□□□□ -1.47
RAE1P78406 AC008429.4-201ENST00000521201 182 ntBASIC5.88□□□□□ -1.47
RAE1P78406 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.88□□□□□ -1.47
RAE1P78406 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.88□□□□□ -1.47
RAE1P78406 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.88□□□□□ -1.47
RAE1P78406 AC008147.3-201ENST00000548666 354 ntBASIC5.88□□□□□ -1.47
RAE1P78406 AL121594.4-201ENST00000556211 1196 ntBASIC5.88□□□□□ -1.47
RAE1P78406 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.88□□□□□ -1.47
RAE1P78406 GLYATL1P2-202ENST00000588046 902 ntBASIC5.88□□□□□ -1.47
RAE1P78406 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.88□□□□□ -1.47
RAE1P78406 AC004890.3-201ENST00000605566 1095 ntBASIC5.88□□□□□ -1.47
RAE1P78406 AL445528.2-201ENST00000620582 470 ntBASIC5.88□□□□□ -1.47
RAE1P78406 MIR6823-201ENST00000622118 61 ntBASIC5.88□□□□□ -1.47
RAE1P78406 AL138693.1-201ENST00000622219 129 ntBASIC5.88□□□□□ -1.47
RAE1P78406 AC004808.1-201ENST00000627671 721 ntBASIC5.88□□□□□ -1.47
RAE1P78406 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.88□□□□□ -1.47
RAE1P78406 AC024587.1-201ENST00000505925 2157 ntBASIC5.88□□□□□ -1.47
RAE1P78406 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
RAE1P78406 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.88□□□□□ -1.47
RAE1P78406 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RAE1P78406 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.88□□□□□ -1.47
RAE1P78406 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RAE1P78406 CR382285.2-201ENST00000624662 1495 ntBASIC5.88□□□□□ -1.47
RAE1P78406 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
RAE1P78406 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.88□□□□□ -1.47
RAE1P78406 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RAE1P78406 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RAE1P78406 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAE1P78406 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAE1P78406 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAE1P78406 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAE1P78406 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAE1P78406 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
RAE1P78406 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAE1P78406 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAE1P78406 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAE1P78406 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAE1P78406 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAE1P78406 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
RAE1P78406 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAE1P78406 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.87□□□□□ -1.47
RAE1P78406 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAE1P78406 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.87□□□□□ -1.47
RAE1P78406 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
RAE1P78406 RANP4-201ENST00000413361 655 ntBASIC5.87□□□□□ -1.47
RAE1P78406 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.87□□□□□ -1.47
RAE1P78406 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAE1P78406 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAE1P78406 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.87□□□□□ -1.47
RAE1P78406 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.87□□□□□ -1.47
RAE1P78406 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.87□□□□□ -1.47
RAE1P78406 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.87□□□□□ -1.47
RAE1P78406 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.87□□□□□ -1.47
RAE1P78406 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.87□□□□□ -1.47
RAE1P78406 AC245291.3-201ENST00000443400 292 ntBASIC5.87□□□□□ -1.47
RAE1P78406 AC092106.1-201ENST00000444291 373 ntBASIC5.87□□□□□ -1.47
RAE1P78406 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.87□□□□□ -1.47
RAE1P78406 RPL34P33-201ENST00000486062 334 ntBASIC5.87□□□□□ -1.47
RAE1P78406 MRPL57P6-201ENST00000506570 309 ntBASIC5.87□□□□□ -1.47
RAE1P78406 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.87□□□□□ -1.47
RAE1P78406 AC093770.1-201ENST00000511559 571 ntBASIC5.87□□□□□ -1.47
RAE1P78406 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.87□□□□□ -1.47
RAE1P78406 AC016550.3-201ENST00000515706 767 ntBASIC5.87□□□□□ -1.47
RAE1P78406 SNORA74.1-201ENST00000516320 180 ntBASIC5.87□□□□□ -1.47
RAE1P78406 HMGB1P46-201ENST00000520062 610 ntBASIC5.87□□□□□ -1.47
RAE1P78406 C1DP5-201ENST00000525775 383 ntBASIC5.87□□□□□ -1.47
RAE1P78406 UBTFL9-201ENST00000534504 1148 ntBASIC5.87□□□□□ -1.47
RAE1P78406 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.87□□□□□ -1.47
RAE1P78406 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
RAE1P78406 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.87□□□□□ -1.47
RAE1P78406 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.87□□□□□ -1.47
RAE1P78406 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.87□□□□□ -1.47
RAE1P78406 AC008555.7-201ENST00000605008 583 ntBASIC5.87□□□□□ -1.47
RAE1P78406 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.87□□□□□ -1.47
RAE1P78406 MIR6811-201ENST00000620409 58 ntBASIC5.87□□□□□ -1.47
RAE1P78406 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.87□□□□□ -1.47
RAE1P78406 AC099654.9-201ENST00000637055 678 ntBASIC5.87□□□□□ -1.47
RAE1P78406 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAE1P78406 EIF3EP1-201ENST00000433978 1316 ntBASIC5.87□□□□□ -1.47
RAE1P78406 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAE1P78406 ZNF101P1-201ENST00000435701 1720 ntBASIC5.87□□□□□ -1.47
RAE1P78406 AC011416.1-201ENST00000514947 1732 ntBASIC5.87□□□□□ -1.47
RAE1P78406 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
RAE1P78406 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.87□□□□□ -1.47
RAE1P78406 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAE1P78406 LINC01613-201ENST00000561476 2780 ntBASIC5.87□□□□□ -1.47
RAE1P78406 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
RAE1P78406 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAE1P78406 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAE1P78406 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
RAE1P78406 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAE1P78406 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAE1P78406 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
RAE1P78406 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RAE1P78406 AC024651.2-201ENST00000562480 2098 ntBASIC5.86□□□□□ -1.47
RAE1P78406 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RAE1P78406 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAE1P78406 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.86□□□□□ -1.47
RAE1P78406 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.86□□□□□ -1.47
RAE1P78406 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms