Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC079171.1-201ENST00000568788 914 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 MIR3135A-201ENST00000578460 77 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 EIF4A3P1-201ENST00000578499 647 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.39□□□□□ -1.39
GFRA1P56159 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.39□□□□□ -1.39
GFRA1P56159 AC096553.1-201ENST00000605169 829 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 AC104184.1-201ENST00000607513 721 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 AC063962.1-201ENST00000608199 521 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 RN7SL126P-201ENST00000616400 299 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
GFRA1P56159 AC007494.3-201ENST00000624660 743 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.39□□□□□ -1.39
GFRA1P56159 AL392088.2-201ENST00000637607 285 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.39□□□□□ -1.39
GFRA1P56159 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
GFRA1P56159 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
GFRA1P56159 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GFRA1P56159 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.39□□□□□ -1.39
GFRA1P56159 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GFRA1P56159 NF1P8-201ENST00000415351 1461 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.39□□□□□ -1.39
GFRA1P56159 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC6.39□□□□□ -1.39
GFRA1P56159 ECM1P2-201ENST00000503354 1577 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GFRA1P56159 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.39□□□□□ -1.39
GFRA1P56159 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GFRA1P56159 AL359263.1-201ENST00000441188 2796 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
GFRA1P56159 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC6.39□□□□□ -1.39
GFRA1P56159 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GFRA1P56159 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
GFRA1P56159 COL6A4P1-202ENST00000487147 4317 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
GFRA1P56159 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.39
GFRA1P56159 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.38□□□□□ -1.39
GFRA1P56159 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
GFRA1P56159 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.38□□□□□ -1.39
GFRA1P56159 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
GFRA1P56159 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
GFRA1P56159 RNA5SP429-201ENST00000363688 109 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
GFRA1P56159 AC006511.2-201ENST00000388966 660 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 RNA5SP498-201ENST00000411342 120 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC6.38□□□□□ -1.39
GFRA1P56159 TCEA1P4-201ENST00000415066 844 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC6.38□□□□□ -1.39
GFRA1P56159 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.38□□□□□ -1.39
GFRA1P56159 AC009784.1-201ENST00000426484 460 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 MTCO1P3-201ENST00000429327 192 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 PHB2P1-201ENST00000434943 890 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.38□□□□□ -1.39
GFRA1P56159 MTCYBP3-201ENST00000445588 1137 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.38□□□□□ -1.39
GFRA1P56159 OR51P1P-201ENST00000447547 942 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.38□□□□□ -1.39
GFRA1P56159 RHEBP2-201ENST00000450289 600 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 ST13P21-201ENST00000453250 1098 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 NDUFA12P1-201ENST00000455914 406 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.38□□□□□ -1.39
GFRA1P56159 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC6.38□□□□□ -1.39
GFRA1P56159 RPL23AP8-201ENST00000479812 475 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.38□□□□□ -1.39
GFRA1P56159 OR7E157P-201ENST00000494376 911 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 AC092045.1-201ENST00000495716 1231 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 AC008885.2-201ENST00000509506 930 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.38□□□□□ -1.39
GFRA1P56159 SCARNA6-201ENST00000515982 265 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
GFRA1P56159 OR7E154P-201ENST00000525174 932 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC6.38□□□□□ -1.39
GFRA1P56159 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.38□□□□□ -1.39
GFRA1P56159 SSU72P6-201ENST00000532644 488 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 AC007115.1-201ENST00000546853 234 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC6.38□□□□□ -1.39
GFRA1P56159 HIGD1AP17-201ENST00000554576 276 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.38□□□□□ -1.39
GFRA1P56159 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC6.38□□□□□ -1.39
GFRA1P56159 AC027807.1-201ENST00000559921 996 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.38□□□□□ -1.39
GFRA1P56159 AC096708.2-201ENST00000577676 512 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.38□□□□□ -1.39
GFRA1P56159 AC010327.2-201ENST00000587647 488 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 OR7E19P-202ENST00000589942 844 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms