Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
BRCA2P51587 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
BRCA2P51587 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
BRCA2P51587 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.09□□□□□ -1.43
BRCA2P51587 DISP1-201ENST00000284476 4762 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
BRCA2P51587 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
BRCA2P51587 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
BRCA2P51587 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
BRCA2P51587 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.09□□□□□ -1.44
BRCA2P51587 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.09□□□□□ -1.44
BRCA2P51587 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
BRCA2P51587 AP006289.1-201ENST00000538089 277 ntBASIC6.09□□□□□ -1.44
BRCA2P51587 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
BRCA2P51587 PART1-201ENST00000504876 5616 ntTSL 2 BASIC6.09□□□□□ -1.44
BRCA2P51587 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.44
BRCA2P51587 AL391261.1-201ENST00000555712 1479 ntBASIC6.08□□□□□ -1.44
BRCA2P51587 ABCA11P-202ENST00000504019 2110 ntBASIC6.08□□□□□ -1.44
BRCA2P51587 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.08□□□□□ -1.44
BRCA2P51587 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
BRCA2P51587 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 DAPK2-213ENST00000612884 8086 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.08□□□□□ -1.44
BRCA2P51587 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 SNORA70.4-201ENST00000365509 134 ntBASIC6.08□□□□□ -1.44
BRCA2P51587 MIR134-201ENST00000385258 73 ntBASIC6.08□□□□□ -1.44
BRCA2P51587 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.08□□□□□ -1.44
BRCA2P51587 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.08□□□□□ -1.44
BRCA2P51587 AC097484.1-201ENST00000471148 389 ntBASIC6.08□□□□□ -1.44
BRCA2P51587 RPL7AP10-201ENST00000481016 791 ntBASIC6.08□□□□□ -1.44
BRCA2P51587 HMGB1P44-201ENST00000508597 572 ntBASIC6.08□□□□□ -1.44
BRCA2P51587 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 MLECP1-201ENST00000615893 709 ntBASIC6.08□□□□□ -1.44
BRCA2P51587 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.08□□□□□ -1.44
BRCA2P51587 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC6.08□□□□□ -1.44
BRCA2P51587 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 SNORA57.1-201ENST00000391227 145 ntBASIC6.08□□□□□ -1.44
BRCA2P51587 AC069213.2-201ENST00000420238 366 ntBASIC6.08□□□□□ -1.44
BRCA2P51587 AC007161.1-204ENST00000423039 460 ntBASIC6.08□□□□□ -1.44
BRCA2P51587 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.08□□□□□ -1.44
BRCA2P51587 OR13K1P-201ENST00000444577 975 ntBASIC6.08□□□□□ -1.44
BRCA2P51587 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.08□□□□□ -1.44
BRCA2P51587 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
BRCA2P51587 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.08□□□□□ -1.44
BRCA2P51587 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
BRCA2P51587 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRCA2P51587 AC211486.3-201ENST00000412694 621 ntBASIC6.08□□□□□ -1.44
BRCA2P51587 RPL17P36-201ENST00000420302 549 ntBASIC6.08□□□□□ -1.44
BRCA2P51587 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.08□□□□□ -1.44
BRCA2P51587 AC091042.1-201ENST00000579213 173 ntBASIC6.08□□□□□ -1.44
BRCA2P51587 RP1-201ENST00000220676 7100 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BRCA2P51587 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.07□□□□□ -1.44
BRCA2P51587 AL359922.2-201ENST00000581788 3017 ntBASIC6.07□□□□□ -1.44
BRCA2P51587 NRP1-206ENST00000374867 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRCA2P51587 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BRCA2P51587 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRCA2P51587 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.07□□□□□ -1.44
BRCA2P51587 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.07□□□□□ -1.44
BRCA2P51587 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.07□□□□□ -1.44
BRCA2P51587 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.07□□□□□ -1.44
BRCA2P51587 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRCA2P51587 AC105046.1-201ENST00000566457 4997 ntBASIC6.07□□□□□ -1.44
BRCA2P51587 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.07□□□□□ -1.44
BRCA2P51587 GON4L-202ENST00000361040 5118 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BRCA2P51587 AL078621.3-201ENST00000623707 2042 ntBASIC6.07□□□□□ -1.44
BRCA2P51587 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRCA2P51587 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRCA2P51587 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.07□□□□□ -1.44
BRCA2P51587 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
BRCA2P51587 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BRCA2P51587 ZAN-204ENST00000546292 8378 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
BRCA2P51587 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BRCA2P51587 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BRCA2P51587 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BRCA2P51587 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.07□□□□□ -1.44
BRCA2P51587 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.07□□□□□ -1.44
BRCA2P51587 AC015977.1-201ENST00000418887 292 ntBASIC6.07□□□□□ -1.44
BRCA2P51587 DDX39BP1-205ENST00000422507 192 ntBASIC6.07□□□□□ -1.44
BRCA2P51587 RPL5P25-201ENST00000441148 775 ntBASIC6.07□□□□□ -1.44
BRCA2P51587 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.07□□□□□ -1.44
BRCA2P51587 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.07□□□□□ -1.44
BRCA2P51587 BNIP3P5-201ENST00000562290 498 ntBASIC6.07□□□□□ -1.44
BRCA2P51587 ZBTB43-202ENST00000373464 5965 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRCA2P51587 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRCA2P51587 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
BRCA2P51587 DOPEY2-202ENST00000399151 7685 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRCA2P51587 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms