Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HTTP42858 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HTTP42858 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.12□□□□□ -1.43
HTTP42858 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HTTP42858 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HTTP42858 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.11□□□□□ -1.43
HTTP42858 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HTTP42858 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HTTP42858 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HTTP42858 TCF20-202ENST00000359486 7410 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HTTP42858 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HTTP42858 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HTTP42858 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.11□□□□□ -1.43
HTTP42858 AC234779.1-201ENST00000425910 285 ntBASIC6.11□□□□□ -1.43
HTTP42858 RN7SKP99-201ENST00000517028 307 ntBASIC6.11□□□□□ -1.43
HTTP42858 MIR4675-201ENST00000577898 77 ntBASIC6.11□□□□□ -1.43
HTTP42858 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.11□□□□□ -1.43
HTTP42858 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HTTP42858 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HTTP42858 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.11□□□□□ -1.43
HTTP42858 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HTTP42858 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HTTP42858 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HTTP42858 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HTTP42858 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HTTP42858 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.11□□□□□ -1.43
HTTP42858 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.11□□□□□ -1.43
HTTP42858 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.11□□□□□ -1.43
HTTP42858 RPS23P2-201ENST00000463671 415 ntBASIC6.11□□□□□ -1.43
HTTP42858 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.11□□□□□ -1.43
HTTP42858 KCTD9P4-201ENST00000526766 1166 ntBASIC6.11□□□□□ -1.43
HTTP42858 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HTTP42858 AC068724.3-201ENST00000625906 87 ntBASIC6.11□□□□□ -1.43
HTTP42858 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HTTP42858 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HTTP42858 PCDHA10-203ENST00000562220 12358 ntBASIC6.11□□□□□ -1.43
HTTP42858 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HTTP42858 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HTTP42858 SAMM50P1-201ENST00000455403 1399 ntBASIC6.11□□□□□ -1.43
HTTP42858 AC013268.3-201ENST00000262716 2324 ntBASIC6.11□□□□□ -1.43
HTTP42858 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HTTP42858 GTF3C1-202ENST00000561623 7015 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HTTP42858 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.1□□□□□ -1.43
HTTP42858 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
HTTP42858 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HTTP42858 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HTTP42858 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.1□□□□□ -1.43
HTTP42858 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.1□□□□□ -1.43
HTTP42858 RPL34P20-201ENST00000442771 351 ntBASIC6.1□□□□□ -1.43
HTTP42858 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.1□□□□□ -1.43
HTTP42858 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HTTP42858 FTH1P8-201ENST00000498161 514 ntBASIC6.1□□□□□ -1.43
HTTP42858 AC090424.1-201ENST00000535243 736 ntBASIC6.1□□□□□ -1.43
HTTP42858 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HTTP42858 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HTTP42858 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HTTP42858 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HTTP42858 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HTTP42858 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.1□□□□□ -1.43
HTTP42858 AL445647.2-201ENST00000615170 130 ntBASIC6.1□□□□□ -1.43
HTTP42858 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HTTP42858 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HTTP42858 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HTTP42858 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HTTP42858 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC6.1□□□□□ -1.43
HTTP42858 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC6.1□□□□□ -1.43
HTTP42858 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.1□□□□□ -1.43
HTTP42858 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HTTP42858 RN7SKP149-201ENST00000363008 344 ntBASIC6.1□□□□□ -1.43
HTTP42858 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
HTTP42858 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HTTP42858 RPL17P50-201ENST00000396131 546 ntBASIC6.1□□□□□ -1.43
HTTP42858 AC069213.2-201ENST00000420238 366 ntBASIC6.1□□□□□ -1.43
HTTP42858 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.1□□□□□ -1.43
HTTP42858 SLC25A15P5-201ENST00000508033 253 ntBASIC6.1□□□□□ -1.43
HTTP42858 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.1□□□□□ -1.43
HTTP42858 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HTTP42858 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.1□□□□□ -1.43
HTTP42858 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.1□□□□□ -1.43
HTTP42858 AC004890.3-201ENST00000605566 1095 ntBASIC6.1□□□□□ -1.43
HTTP42858 AL080317.3-201ENST00000607434 4315 ntBASIC6.1□□□□□ -1.43
HTTP42858 SP1-202ENST00000426431 7603 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HTTP42858 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HTTP42858 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HTTP42858 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.1□□□□□ -1.43
HTTP42858 PCDHA4-204ENST00000618834 10557 ntBASIC6.1□□□□□ -1.43
HTTP42858 AC005725.1-201ENST00000577346 2607 ntBASIC6.1□□□□□ -1.43
HTTP42858 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HTTP42858 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HTTP42858 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HTTP42858 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.1□□□□□ -1.43
HTTP42858 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.1□□□□□ -1.43
HTTP42858 AC007559.1-201ENST00000428736 355 ntBASIC6.1□□□□□ -1.43
HTTP42858 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.1□□□□□ -1.43
HTTP42858 AC074255.1-201ENST00000511259 501 ntBASIC6.1□□□□□ -1.43
HTTP42858 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.1□□□□□ -1.43
HTTP42858 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.1□□□□□ -1.43
HTTP42858 AC091042.1-201ENST00000579213 173 ntBASIC6.1□□□□□ -1.43
HTTP42858 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HTTP42858 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms