Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC026951.2-201ENST00000613847 241 ntBASIC6.82□□□□□ -1.32
LTBRP36941 AC018692.2-201ENST00000624130 348 ntBASIC6.82□□□□□ -1.32
LTBRP36941 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC6.82□□□□□ -1.32
LTBRP36941 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
LTBRP36941 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
LTBRP36941 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
LTBRP36941 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
LTBRP36941 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
LTBRP36941 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.82□□□□□ -1.32
LTBRP36941 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC6.82□□□□□ -1.32
LTBRP36941 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
LTBRP36941 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
LTBRP36941 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LTBRP36941 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
LTBRP36941 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.81□□□□□ -1.32
LTBRP36941 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
LTBRP36941 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.81□□□□□ -1.32
LTBRP36941 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
LTBRP36941 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
LTBRP36941 CDY11P-201ENST00000447168 1651 ntBASIC6.81□□□□□ -1.32
LTBRP36941 SPATA31C2-201ENST00000324915 3777 ntBASIC6.81□□□□□ -1.32
LTBRP36941 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 AC006058.1-201ENST00000568686 5067 ntBASIC6.81□□□□□ -1.32
LTBRP36941 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC6.81□□□□□ -1.32
LTBRP36941 AC079298.1-201ENST00000625026 1619 ntBASIC6.81□□□□□ -1.32
LTBRP36941 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
LTBRP36941 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC6.81□□□□□ -1.32
LTBRP36941 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
LTBRP36941 RNU6-1214P-201ENST00000363650 109 ntBASIC6.81□□□□□ -1.32
LTBRP36941 U6.112-201ENST00000384129 70 ntBASIC6.81□□□□□ -1.32
LTBRP36941 SNORD116-12-201ENST00000384468 92 ntBASIC6.81□□□□□ -1.32
LTBRP36941 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.81□□□□□ -1.32
LTBRP36941 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.81□□□□□ -1.32
LTBRP36941 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.81□□□□□ -1.32
LTBRP36941 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC6.81□□□□□ -1.32
LTBRP36941 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.81□□□□□ -1.32
LTBRP36941 AC245047.5-201ENST00000437312 556 ntBASIC6.81□□□□□ -1.32
LTBRP36941 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.81□□□□□ -1.32
LTBRP36941 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 SBDSP1-204ENST00000453858 737 ntBASIC6.81□□□□□ -1.32
LTBRP36941 AL157777.1-201ENST00000468100 304 ntBASIC6.81□□□□□ -1.32
LTBRP36941 AC023245.1-201ENST00000468501 517 ntBASIC6.81□□□□□ -1.32
LTBRP36941 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.81□□□□□ -1.32
LTBRP36941 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.81□□□□□ -1.32
LTBRP36941 Y_RNA.655-201ENST00000515919 96 ntBASIC6.81□□□□□ -1.32
LTBRP36941 RNU6-1334P-201ENST00000516032 105 ntBASIC6.81□□□□□ -1.32
LTBRP36941 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.81□□□□□ -1.32
LTBRP36941 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.81□□□□□ -1.32
LTBRP36941 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.81□□□□□ -1.32
LTBRP36941 AC007346.1-201ENST00000569208 867 ntBASIC6.81□□□□□ -1.32
LTBRP36941 MIR3176-201ENST00000582210 90 ntBASIC6.81□□□□□ -1.32
LTBRP36941 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.81□□□□□ -1.32
LTBRP36941 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.81□□□□□ -1.32
LTBRP36941 AC009237.12-201ENST00000604755 742 ntBASIC6.81□□□□□ -1.32
LTBRP36941 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.81□□□□□ -1.32
LTBRP36941 MIR6826-201ENST00000617808 98 ntBASIC6.81□□□□□ -1.32
LTBRP36941 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC6.81□□□□□ -1.32
LTBRP36941 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.81□□□□□ -1.32
LTBRP36941 UGP2-231ENST00000627474 264 ntTSL 5 BASIC6.81□□□□□ -1.32
LTBRP36941 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
LTBRP36941 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
LTBRP36941 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 AL353763.2-201ENST00000623489 1903 ntBASIC6.81□□□□□ -1.32
LTBRP36941 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.81□□□□□ -1.32
LTBRP36941 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
LTBRP36941 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.81□□□□□ -1.32
LTBRP36941 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LTBRP36941 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
LTBRP36941 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
LTBRP36941 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LTBRP36941 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LTBRP36941 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
LTBRP36941 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
LTBRP36941 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.8□□□□□ -1.32
LTBRP36941 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.8□□□□□ -1.32
LTBRP36941 AL390862.1-201ENST00000635467 1469 ntBASIC6.8□□□□□ -1.32
LTBRP36941 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.8□□□□□ -1.32
LTBRP36941 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LTBRP36941 AP003972.1-201ENST00000625192 5446 ntBASIC6.8□□□□□ -1.32
LTBRP36941 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LTBRP36941 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LTBRP36941 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC6.8□□□□□ -1.32
LTBRP36941 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
LTBRP36941 RNA5SP273-201ENST00000362484 113 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms