Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ZNF658B-201ENST00000602828 3408 ntBASIC6.49□□□□□ -1.37
CHRNA1P02708 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHRNA1P02708 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHRNA1P02708 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHRNA1P02708 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CHRNA1P02708 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHRNA1P02708 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.49□□□□□ -1.37
CHRNA1P02708 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
CHRNA1P02708 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHRNA1P02708 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHRNA1P02708 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.48□□□□□ -1.37
CHRNA1P02708 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.48□□□□□ -1.37
CHRNA1P02708 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
CHRNA1P02708 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.48□□□□□ -1.37
CHRNA1P02708 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.48□□□□□ -1.37
CHRNA1P02708 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHRNA1P02708 Z93019.1-201ENST00000416450 973 ntBASIC6.48□□□□□ -1.37
CHRNA1P02708 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.48□□□□□ -1.37
CHRNA1P02708 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.48□□□□□ -1.37
CHRNA1P02708 AC099677.3-201ENST00000427081 395 ntBASIC6.48□□□□□ -1.37
CHRNA1P02708 BRWD1P3-201ENST00000428816 390 ntBASIC6.48□□□□□ -1.37
CHRNA1P02708 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CHRNA1P02708 HMGB3P24-201ENST00000433260 622 ntBASIC6.48□□□□□ -1.37
CHRNA1P02708 RPS12P17-201ENST00000438591 377 ntBASIC6.48□□□□□ -1.37
CHRNA1P02708 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.48□□□□□ -1.37
CHRNA1P02708 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.48□□□□□ -1.37
CHRNA1P02708 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.48□□□□□ -1.37
CHRNA1P02708 RPL23AP40-201ENST00000487630 390 ntBASIC6.48□□□□□ -1.37
CHRNA1P02708 CCDC11P1-201ENST00000503137 1162 ntBASIC6.48□□□□□ -1.37
CHRNA1P02708 AC008638.1-201ENST00000506035 866 ntBASIC6.48□□□□□ -1.37
CHRNA1P02708 SNORA43.3-201ENST00000517240 103 ntBASIC6.48□□□□□ -1.37
CHRNA1P02708 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CHRNA1P02708 OR7E158P-201ENST00000524483 910 ntBASIC6.48□□□□□ -1.37
CHRNA1P02708 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.48□□□□□ -1.37
CHRNA1P02708 DPPA2P4-201ENST00000563717 878 ntBASIC6.48□□□□□ -1.37
CHRNA1P02708 OR4H6P-201ENST00000563771 921 ntBASIC6.48□□□□□ -1.37
CHRNA1P02708 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHRNA1P02708 AC137695.1-201ENST00000604126 489 ntBASIC6.48□□□□□ -1.37
CHRNA1P02708 AC145423.1-201ENST00000605712 336 ntBASIC6.48□□□□□ -1.37
CHRNA1P02708 AL445670.1-201ENST00000618889 801 ntBASIC6.48□□□□□ -1.37
CHRNA1P02708 AC087565.3-203ENST00000641018 837 ntBASIC6.48□□□□□ -1.37
CHRNA1P02708 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHRNA1P02708 AL662795.2-201ENST00000624252 3706 ntBASIC6.48□□□□□ -1.37
CHRNA1P02708 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.48□□□□□ -1.37
CHRNA1P02708 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHRNA1P02708 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHRNA1P02708 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.47□□□□□ -1.37
CHRNA1P02708 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.47□□□□□ -1.37
CHRNA1P02708 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
CHRNA1P02708 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHRNA1P02708 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHRNA1P02708 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHRNA1P02708 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHRNA1P02708 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHRNA1P02708 AC027279.4-201ENST00000624371 2072 ntBASIC6.47□□□□□ -1.37
CHRNA1P02708 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHRNA1P02708 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHRNA1P02708 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHRNA1P02708 AL353626.3-201ENST00000413399 657 ntBASIC6.47□□□□□ -1.37
CHRNA1P02708 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.47□□□□□ -1.37
CHRNA1P02708 EEF1B2P6-201ENST00000445713 673 ntBASIC6.47□□□□□ -1.37
CHRNA1P02708 RAB28P2-201ENST00000454299 641 ntBASIC6.47□□□□□ -1.37
CHRNA1P02708 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.47□□□□□ -1.37
CHRNA1P02708 AC008945.1-201ENST00000505144 499 ntBASIC6.47□□□□□ -1.37
CHRNA1P02708 DUTP7-201ENST00000507982 486 ntBASIC6.47□□□□□ -1.37
CHRNA1P02708 IGKV2-18-201ENST00000522607 343 ntBASIC6.47□□□□□ -1.37
CHRNA1P02708 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.47□□□□□ -1.37
CHRNA1P02708 AC051619.2-201ENST00000559063 397 ntBASIC6.47□□□□□ -1.37
CHRNA1P02708 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.47□□□□□ -1.37
CHRNA1P02708 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.47□□□□□ -1.37
CHRNA1P02708 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHRNA1P02708 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.47□□□□□ -1.37
CHRNA1P02708 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHRNA1P02708 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHRNA1P02708 LCOR-201ENST00000286067 4542 ntBASIC6.47□□□□□ -1.37
CHRNA1P02708 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHRNA1P02708 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHRNA1P02708 Z83820.1-201ENST00000456978 1499 ntBASIC6.47□□□□□ -1.37
CHRNA1P02708 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CHRNA1P02708 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CHRNA1P02708 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
CHRNA1P02708 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CHRNA1P02708 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CHRNA1P02708 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
CHRNA1P02708 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
CHRNA1P02708 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CHRNA1P02708 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CHRNA1P02708 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CHRNA1P02708 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CHRNA1P02708 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.46□□□□□ -1.38
CHRNA1P02708 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CHRNA1P02708 RN7SKP166-201ENST00000410812 305 ntBASIC6.46□□□□□ -1.38
CHRNA1P02708 AL596448.1-201ENST00000415024 392 ntBASIC6.46□□□□□ -1.38
CHRNA1P02708 AC007562.1-201ENST00000421819 517 ntBASIC6.46□□□□□ -1.38
CHRNA1P02708 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.46□□□□□ -1.38
CHRNA1P02708 Z84478.1-201ENST00000438230 1219 ntBASIC6.46□□□□□ -1.38
CHRNA1P02708 AC023274.2-201ENST00000445264 521 ntBASIC6.46□□□□□ -1.38
CHRNA1P02708 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.46□□□□□ -1.38
CHRNA1P02708 AL022319.1-201ENST00000458183 1167 ntBASIC6.46□□□□□ -1.38
CHRNA1P02708 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms