Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.28□□□□□ -1.4
CNOT4O95628 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.28□□□□□ -1.4
CNOT4O95628 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.28□□□□□ -1.4
CNOT4O95628 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNOT4O95628 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.27□□□□□ -1.41
CNOT4O95628 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNOT4O95628 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.27□□□□□ -1.41
CNOT4O95628 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNOT4O95628 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.27□□□□□ -1.41
CNOT4O95628 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CNOT4O95628 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNOT4O95628 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNOT4O95628 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CNOT4O95628 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.27□□□□□ -1.41
CNOT4O95628 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNOT4O95628 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.27□□□□□ -1.41
CNOT4O95628 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.27□□□□□ -1.41
CNOT4O95628 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNOT4O95628 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNOT4O95628 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CNOT4O95628 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CNOT4O95628 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNOT4O95628 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNOT4O95628 OR11H13P-201ENST00000359695 979 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 Y_RNA.51-201ENST00000362725 102 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 RNA5SP472-201ENST00000363868 119 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 RN7SKP107-201ENST00000364157 290 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 SNORA70.5-201ENST00000365519 135 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 RNU6-1242P-201ENST00000391052 103 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 AL355379.1-201ENST00000405542 640 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 AC245060.4-201ENST00000413293 1121 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 AC096537.2-201ENST00000413707 714 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.27□□□□□ -1.41
CNOT4O95628 NENFP1-201ENST00000419476 466 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 RPL24P2-201ENST00000421023 475 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC6.27□□□□□ -1.41
CNOT4O95628 AL121916.1-201ENST00000429405 308 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.27□□□□□ -1.41
CNOT4O95628 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.27□□□□□ -1.41
CNOT4O95628 AC090018.1-201ENST00000434369 367 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC6.27□□□□□ -1.41
CNOT4O95628 AL008629.1-201ENST00000438615 184 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.27□□□□□ -1.41
CNOT4O95628 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.27□□□□□ -1.41
CNOT4O95628 RPL6P5-201ENST00000445678 828 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 PRDX1P1-201ENST00000449329 596 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC6.27□□□□□ -1.41
CNOT4O95628 KF459542.1-201ENST00000450908 553 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.27□□□□□ -1.41
CNOT4O95628 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.27□□□□□ -1.41
CNOT4O95628 VN1R6P-201ENST00000458417 907 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.27□□□□□ -1.41
CNOT4O95628 AC107015.1-201ENST00000466902 747 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 RPS3AP43-201ENST00000479743 781 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 RN7SL849P-201ENST00000485236 295 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.27□□□□□ -1.41
CNOT4O95628 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.27□□□□□ -1.41
CNOT4O95628 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.27□□□□□ -1.41
CNOT4O95628 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.27□□□□□ -1.41
CNOT4O95628 GAPDHP71-201ENST00000511530 1003 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 SCARNA6-201ENST00000515982 265 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 RNA5SP318-201ENST00000516352 92 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 RNU5A-4P-201ENST00000516588 111 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CNOT4O95628 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.27□□□□□ -1.41
CNOT4O95628 CYB5AP5-201ENST00000549779 389 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC6.27□□□□□ -1.41
CNOT4O95628 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNOT4O95628 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.27□□□□□ -1.41
CNOT4O95628 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC6.27□□□□□ -1.41
CNOT4O95628 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.27□□□□□ -1.41
CNOT4O95628 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.27□□□□□ -1.41
CNOT4O95628 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC6.27□□□□□ -1.41
CNOT4O95628 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.27□□□□□ -1.41
CNOT4O95628 AC079610.2-201ENST00000604818 690 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 AL135786.2-201ENST00000608422 615 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 AC005021.1-201ENST00000608730 355 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 AC019131.2-201ENST00000609071 870 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 AC245100.7-201ENST00000609678 442 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
CNOT4O95628 AL121895.2-201ENST00000619558 447 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 AL450226.2-201ENST00000622913 439 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 AC090617.9-201ENST00000623751 147 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNOT4O95628 AC084035.1-201ENST00000634543 607 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 AC007671.2-201ENST00000637344 619 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 CASC19-232ENST00000641480 1244 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.27□□□□□ -1.41
CNOT4O95628 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNOT4O95628 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNOT4O95628 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.27□□□□□ -1.41
CNOT4O95628 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.27□□□□□ -1.41
CNOT4O95628 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNOT4O95628 DYNC1I2P1-201ENST00000435916 1838 ntBASIC6.27□□□□□ -1.41
CNOT4O95628 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.27□□□□□ -1.41
CNOT4O95628 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNOT4O95628 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNOT4O95628 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CNOT4O95628 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CNOT4O95628 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms