Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC8.41□□□□□ -1.06
CCDC144AA2RUR9 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC8.41□□□□□ -1.06
CCDC144AA2RUR9 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC144AA2RUR9 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC8.41□□□□□ -1.06
CCDC144AA2RUR9 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC144AA2RUR9 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC144AA2RUR9 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC144AA2RUR9 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC8.41□□□□□ -1.06
CCDC144AA2RUR9 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC144AA2RUR9 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC8.41□□□□□ -1.06
CCDC144AA2RUR9 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC144AA2RUR9 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC144AA2RUR9 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC8.41□□□□□ -1.06
CCDC144AA2RUR9 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC144AA2RUR9 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC144AA2RUR9 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
CCDC144AA2RUR9 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC8.41□□□□□ -1.06
CCDC144AA2RUR9 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC8.41□□□□□ -1.06
CCDC144AA2RUR9 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC8.4□□□□□ -1.06
CCDC144AA2RUR9 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CCDC144AA2RUR9 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
CCDC144AA2RUR9 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
CCDC144AA2RUR9 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC8.4□□□□□ -1.06
CCDC144AA2RUR9 RPL17P2-201ENST00000491913 451 ntBASIC8.4□□□□□ -1.06
CCDC144AA2RUR9 SCARNA6.1-201ENST00000516989 238 ntBASIC8.4□□□□□ -1.06
CCDC144AA2RUR9 AC090424.1-201ENST00000535243 736 ntBASIC8.4□□□□□ -1.06
CCDC144AA2RUR9 OR7A1P-201ENST00000601206 970 ntBASIC8.4□□□□□ -1.06
CCDC144AA2RUR9 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC8.4□□□□□ -1.06
CCDC144AA2RUR9 AL691477.1-201ENST00000624398 162 ntBASIC8.4□□□□□ -1.06
CCDC144AA2RUR9 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
CCDC144AA2RUR9 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CCDC144AA2RUR9 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC8.4□□□□□ -1.06
CCDC144AA2RUR9 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CCDC144AA2RUR9 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC8.4□□□□□ -1.06
CCDC144AA2RUR9 AL662795.2-201ENST00000624252 3706 ntBASIC8.4□□□□□ -1.06
CCDC144AA2RUR9 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC8.4□□□□□ -1.06
CCDC144AA2RUR9 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC8.4□□□□□ -1.07
CCDC144AA2RUR9 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
CCDC144AA2RUR9 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
CCDC144AA2RUR9 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.07
CCDC144AA2RUR9 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.07
CCDC144AA2RUR9 MRE11P1-201ENST00000464884 2127 ntBASIC8.4□□□□□ -1.07
CCDC144AA2RUR9 LINC02019-201ENST00000608605 2060 ntBASIC8.4□□□□□ -1.07
CCDC144AA2RUR9 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 SRRM1P3-201ENST00000426911 2678 ntBASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 FIGN-202ENST00000409634 746 ntTSL 5 BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 AC019205.1-201ENST00000421830 730 ntBASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 AC073610.1-201ENST00000489971 396 ntBASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 EIF3LP3-201ENST00000495197 822 ntBASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 IGLV2-28-201ENST00000520681 304 ntBASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 AL137246.2-201ENST00000613439 662 ntBASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 HOTTIP_3.1-201ENST00000619957 337 ntBASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 OLMALINC-203ENST00000641087 3779 ntBASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 MFSD8-219ENST00000641228 2559 ntBASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC144AA2RUR9 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 GTF2IP4-201ENST00000453092 2054 ntBASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 SNORA70H-201ENST00000383910 135 ntBASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 SNORA70J-201ENST00000384182 135 ntBASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 DPPA2P3-201ENST00000411853 655 ntBASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 MINCR-206ENST00000524335 499 ntTSL 2 BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 DCN-210ENST00000547568 823 ntTSL 3 BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 HCG18-243ENST00000602498 327 ntTSL 3 BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 YES1P1-201ENST00000418510 1628 ntBASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC8.38□□□□□ -1.07
CCDC144AA2RUR9 RN7SKP162-201ENST00000363605 345 ntBASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms