Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 NPM1P18-201ENST00000434232 732 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 SEPT14P12-201ENST00000442280 560 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AC010240.2-201ENST00000445363 1205 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 RPL9P15-201ENST00000491096 532 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AC106822.1-201ENST00000502647 526 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 TPM3P3-201ENST00000521343 354 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 OR56A7P-201ENST00000524865 941 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AC002519.2-203ENST00000567043 837 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AC004232.2-201ENST00000574245 821 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AC027216.1-201ENST00000577726 685 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 MIR4701-201ENST00000583094 63 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 MIR132-201ENST00000591554 101 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 uc_338.31-201ENST00000615595 186 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AC244100.4-201ENST00000617747 388 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AC079776.5-201ENST00000641920 211 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AC010266.2-201ENST00000564741 3255 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AL121768.1-201ENST00000613917 2544 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AC016583.1-201ENST00000624221 2431 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AC018717.1-201ENST00000457712 1505 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 BCORP1-203ENST00000513194 5093 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 AC109446.4-201ENST00000623235 2755 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 RNA5SP375-201ENST00000362975 119 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 AL132875.1-201ENST00000403623 949 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 PTCD2P2-201ENST00000415579 1095 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 USP24P1-201ENST00000433802 779 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 AL731534.1-201ENST00000434711 269 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 GAPDHP59-201ENST00000435908 267 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 CLNS1AP1-201ENST00000435954 682 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 RPL5P25-201ENST00000441148 775 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 TRIM60P16-201ENST00000444048 694 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 AL512593.1-201ENST00000444758 779 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 HMGB1P7-201ENST00000450921 612 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 RPL23AP40-201ENST00000487630 390 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 AC105420.1-201ENST00000504389 582 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 AC008945.1-201ENST00000505144 499 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 AC112484.3-201ENST00000505910 329 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 CR383658.1-201ENST00000514609 734 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 MRPS21P8-201ENST00000569196 235 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 AC016839.1-201ENST00000578162 867 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 RFPL4AP6-201ENST00000616792 846 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 MAPK10-350ENST00000641777 965 ntBASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DRB4X5D2U9 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms