Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AC005084.1-201ENST00000605160 304 ntBASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 CYP4F35P-202ENST00000636121 390 ntBASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 SAMMSON-209ENST00000641222 1100 ntBASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 ZBTB43-202ENST00000373464 5965 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AC099677.3-201ENST00000427081 395 ntBASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 SDC4P-201ENST00000453285 601 ntBASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 AC073072.2-201ENST00000447425 348 ntBASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 AC003992.1-201ENST00000635364 557 ntBASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 RN7SKP23-201ENST00000625159 4301 ntBASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 RNU1-43P-201ENST00000365052 165 ntBASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 snoU13.20-201ENST00000459180 104 ntBASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 RPL7AP10-201ENST00000481016 791 ntBASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 AC134349.2-201ENST00000535136 910 ntBASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 AL021368.3-201ENST00000607119 578 ntBASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 AC024255.1-201ENST00000614376 102 ntBASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 RAD17P2-201ENST00000451754 1977 ntBASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 LINC01616-201ENST00000561816 2280 ntBASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 ZFYVE26-201ENST00000347230 9675 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 AL391261.1-201ENST00000555712 1479 ntBASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSMD1Q96PZ7 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 OR4K12P-201ENST00000406538 961 ntBASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 COL4A6-208ENST00000538570 6528 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 OR55B1P-203ENST00000641518 2602 ntBASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 CACNB2-209ENST00000396576 4464 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSMD1Q96PZ7 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms