Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AC027290.2-201ENST00000623210 18662 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 Y_RNA.209-201ENST00000364156 111 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 RPL12P23-201ENST00000405880 490 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 RN7SKP39-201ENST00000410773 322 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 RN7SKP121-201ENST00000410842 305 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 METTL15P3-201ENST00000415522 1221 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 E2F6P1-201ENST00000428850 745 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 USP24P1-201ENST00000433802 779 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AC013403.1-201ENST00000436954 263 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 PPIAP10-201ENST00000438675 458 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AC019185.3-201ENST00000438805 323 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 E2F6P3-201ENST00000441743 743 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 SEPT7P3-201ENST00000455017 621 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 RN7SL413P-201ENST00000482700 297 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AC018645.1-201ENST00000505003 109 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 SNX18P24-201ENST00000505249 671 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AC090958.1-201ENST00000511122 351 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 MINOS1P4-201ENST00000515470 318 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 RNA5SP418-201ENST00000515951 117 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AP001994.1-201ENST00000527539 826 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AC089984.3-201ENST00000552838 363 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 RPL29P33-201ENST00000587474 316 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AC060780.2-201ENST00000589047 198 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AC004839.1-201ENST00000610269 501 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AC007786.3-201ENST00000615154 596 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AC024884.1-201ENST00000620583 399 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 DLST-216ENST00000626051 252 ntTSL 5 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AC099654.6-201ENST00000636487 512 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AC009220.2-201ENST00000489759 1751 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 ZNF710-AS1-202ENST00000620791 2133 ntBASIC4.42□□□□□ -1.7
AP1S3Q96PC3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.42□□□□□ -1.7
AP1S3Q96PC3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 AC004817.4-201ENST00000602396 3625 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
AP1S3Q96PC3 RNU1-5P-201ENST00000362684 144 ntBASIC4.41□□□□□ -1.7
AP1S3Q96PC3 RNU1-49P-201ENST00000363468 159 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms