Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 SWT1-202ENST00000367501 3001 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 AL353898.3-201ENST00000624679 1755 ntBASIC8.66□□□□□ -1.02
LRCH3Q96II8 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 CPNE8-201ENST00000331366 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 ABHD4-203ENST00000428304 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LRCH3Q96II8 CYP4A22-203ENST00000371891 2535 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
LRCH3Q96II8 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
LRCH3Q96II8 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
LRCH3Q96II8 HRH2-204ENST00000636584 4067 ntTSL 3 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 THBS3-210ENST00000541576 3200 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
LRCH3Q96II8 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
LRCH3Q96II8 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 CCDC129-202ENST00000407970 3269 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
LRCH3Q96II8 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LRCH3Q96II8 RPL11P4-201ENST00000332269 436 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 RN7SKP118-201ENST00000364331 330 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 RPS3AP36-201ENST00000398190 775 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 AC073136.2-201ENST00000417282 849 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 HMGB3P20-201ENST00000417997 600 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 AL592293.2-201ENST00000422292 996 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 CHCHD3P1-201ENST00000425516 676 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LRCH3Q96II8 MRPL50P4-201ENST00000446432 475 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 OR7A15P-201ENST00000449848 1009 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 AL390728.3-201ENST00000452704 270 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 AC022080.2-201ENST00000452932 533 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 RN7SL791P-201ENST00000467868 295 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 AC093278.1-201ENST00000494700 600 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 RPL10P7-201ENST00000495649 625 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LRCH3Q96II8 APOBEC3AP1-201ENST00000511396 287 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 AC016559.1-201ENST00000511420 199 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 AC090424.1-201ENST00000535243 736 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 AC044860.3-201ENST00000559957 368 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 RN7SL753P-201ENST00000581238 290 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 AC006116.6-201ENST00000593258 1103 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LRCH3Q96II8 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 AC183089.2-201ENST00000637931 916 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 AL596275.2-203ENST00000641951 371 ntBASIC8.65□□□□□ -1.02
LRCH3Q96II8 LINC00672-201ENST00000583195 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LRCH3Q96II8 PREPL-204ENST00000409272 3030 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 OR51D1-202ENST00000641817 3561 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
LRCH3Q96II8 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
LRCH3Q96II8 SP140-204ENST00000417495 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
LRCH3Q96II8 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC8.65□□□□□ -1.03
LRCH3Q96II8 HSPD1P1-201ENST00000503199 1726 ntBASIC8.65□□□□□ -1.03
LRCH3Q96II8 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
LRCH3Q96II8 AP000542.3-201ENST00000623391 6114 ntBASIC8.65□□□□□ -1.03
LRCH3Q96II8 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
LRCH3Q96II8 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.03
LRCH3Q96II8 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 DCN-220ENST00000552962 1930 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 KLHL32-205ENST00000539200 3600 ntTSL 2 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LRCH3Q96II8 AC006511.3-201ENST00000624929 1783 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 NXF5-205ENST00000473265 1348 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
LRCH3Q96II8 AC109315.1-201ENST00000584143 1347 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 ERMAP-201ENST00000328249 3949 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
LRCH3Q96II8 C11orf70-201ENST00000434758 2193 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LRCH3Q96II8 RPL21P132-201ENST00000331267 462 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LRCH3Q96II8 RNU6-1331P-201ENST00000363658 106 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 RN7SKP50-201ENST00000364694 315 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 RNU5E-5P-201ENST00000365379 116 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LRCH3Q96II8 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LRCH3Q96II8 AL512422.1-201ENST00000407033 553 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 AL137784.1-201ENST00000407121 745 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 JKAMPP1-201ENST00000413804 919 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 AC009362.1-201ENST00000427253 406 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 AL358934.1-201ENST00000432346 324 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms