Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LMO3Q8TAP4 AC117409.1-201ENST00000470499 1310 ntBASIC6.25□□□□□ -1.41
LMO3Q8TAP4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 AP004607.3-201ENST00000530354 3915 ntBASIC6.24□□□□□ -1.41
LMO3Q8TAP4 AC009962.1-201ENST00000567327 3813 ntBASIC6.24□□□□□ -1.41
LMO3Q8TAP4 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 AC004386.1-201ENST00000393214 761 ntBASIC6.24□□□□□ -1.41
LMO3Q8TAP4 MIR1203-201ENST00000408812 85 ntBASIC6.24□□□□□ -1.41
LMO3Q8TAP4 AL357752.1-201ENST00000412817 349 ntBASIC6.24□□□□□ -1.41
LMO3Q8TAP4 METTL15P3-201ENST00000415522 1221 ntBASIC6.24□□□□□ -1.41
LMO3Q8TAP4 DEFA9P-201ENST00000433042 285 ntBASIC6.24□□□□□ -1.41
LMO3Q8TAP4 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 AC242426.1-201ENST00000435270 960 ntBASIC6.24□□□□□ -1.41
LMO3Q8TAP4 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 RN7SL168P-201ENST00000463821 279 ntBASIC6.24□□□□□ -1.41
LMO3Q8TAP4 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 WBP1LP3-201ENST00000523033 208 ntBASIC6.24□□□□□ -1.41
LMO3Q8TAP4 SCARNA9-201ENST00000530422 353 ntBASIC6.24□□□□□ -1.41
LMO3Q8TAP4 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 AC134669.1-201ENST00000581275 672 ntBASIC6.24□□□□□ -1.41
LMO3Q8TAP4 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.24□□□□□ -1.41
LMO3Q8TAP4 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LMO3Q8TAP4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 AC232271.1-201ENST00000602455 2715 ntBASIC6.23□□□□□ -1.41
LMO3Q8TAP4 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 PDZK1P1-202ENST00000425209 1350 ntBASIC6.23□□□□□ -1.41
LMO3Q8TAP4 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.23□□□□□ -1.41
LMO3Q8TAP4 AC066692.1-201ENST00000421721 457 ntBASIC6.23□□□□□ -1.41
LMO3Q8TAP4 RPS6P14-201ENST00000425165 719 ntBASIC6.23□□□□□ -1.41
LMO3Q8TAP4 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 PCBP2P1-201ENST00000437262 977 ntBASIC6.23□□□□□ -1.41
LMO3Q8TAP4 AL512637.1-201ENST00000439523 1231 ntBASIC6.23□□□□□ -1.41
LMO3Q8TAP4 EIF5AP4-201ENST00000441206 465 ntBASIC6.23□□□□□ -1.41
LMO3Q8TAP4 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 SNORA48.9-201ENST00000516419 162 ntBASIC6.23□□□□□ -1.41
LMO3Q8TAP4 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 TRIM77BP-201ENST00000524985 1119 ntBASIC6.23□□□□□ -1.41
LMO3Q8TAP4 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 AC068305.2-201ENST00000550567 1205 ntBASIC6.23□□□□□ -1.41
LMO3Q8TAP4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 AP005901.4-201ENST00000577336 569 ntBASIC6.23□□□□□ -1.41
LMO3Q8TAP4 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 AC025857.2-201ENST00000602711 238 ntBASIC6.23□□□□□ -1.41
LMO3Q8TAP4 HIRAP1-201ENST00000605318 787 ntBASIC6.23□□□□□ -1.41
LMO3Q8TAP4 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.23□□□□□ -1.41
LMO3Q8TAP4 AL035661.1-201ENST00000620459 1144 ntBASIC6.23□□□□□ -1.41
LMO3Q8TAP4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 AL158152.1-201ENST00000602652 1435 ntBASIC6.23□□□□□ -1.41
LMO3Q8TAP4 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LMO3Q8TAP4 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LMO3Q8TAP4 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.22□□□□□ -1.41
LMO3Q8TAP4 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms