Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC9.4□□□□□ -0.91
SNAPC4Q5SXM2 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC9.4□□□□□ -0.91
SNAPC4Q5SXM2 AC079075.1-201ENST00000559543 878 ntBASIC9.4□□□□□ -0.91
SNAPC4Q5SXM2 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
SNAPC4Q5SXM2 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
SNAPC4Q5SXM2 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 AP000866.6-201ENST00000638898 3579 ntBASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 LINC01616-201ENST00000561816 2280 ntBASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 RNU6ATAC7P-201ENST00000408111 127 ntBASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 U3.36-201ENST00000408418 213 ntBASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 MYL6P5-201ENST00000412707 459 ntBASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 AL049745.1-201ENST00000433953 286 ntBASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 PRELID3BP5-201ENST00000508612 460 ntBASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 AC007494.1-201ENST00000562293 760 ntBASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 RBM22P1-201ENST00000578589 1214 ntBASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SNAPC4Q5SXM2 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 MFSD8-216ENST00000641147 4009 ntBASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 CEACAMP9-201ENST00000442990 513 ntBASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 BMPR1APS2-201ENST00000527904 1012 ntBASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 BLZF2P-201ENST00000553776 1130 ntBASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 AC024589.2-201ENST00000605642 1294 ntBASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 AC005618.1-201ENST00000606901 3148 ntBASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 AL391261.1-201ENST00000555712 1479 ntBASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC9.38□□□□□ -0.91
SNAPC4Q5SXM2 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 FAM32BP-201ENST00000344033 333 ntBASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 RNA5SP87-201ENST00000384155 118 ntBASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 MIR130A-201ENST00000385274 89 ntBASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 AC019205.1-201ENST00000421830 730 ntBASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 CCDC11P1-201ENST00000503137 1162 ntBASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 OR5AZ1P-201ENST00000527448 943 ntBASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SNAPC4Q5SXM2 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 NIFKP3-201ENST00000417799 865 ntBASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 AC090114.3-201ENST00000479267 829 ntBASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 RN7SL447P-201ENST00000494711 245 ntBASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 AC131649.2-201ENST00000624925 4439 ntBASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 PANDAR-201ENST00000629595 1506 ntBASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
SNAPC4Q5SXM2 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms