Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.53□□□□□ -1.36
TPM4P67936 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TPM4P67936 MUC2-202ENST00000613187 4845 ntBASIC6.53□□□□□ -1.36
TPM4P67936 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TPM4P67936 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.53□□□□□ -1.36
TPM4P67936 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TPM4P67936 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.53□□□□□ -1.36
TPM4P67936 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TPM4P67936 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
TPM4P67936 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
TPM4P67936 RPL6P21-201ENST00000418672 846 ntBASIC6.53□□□□□ -1.36
TPM4P67936 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.53□□□□□ -1.36
TPM4P67936 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.53□□□□□ -1.36
TPM4P67936 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.53□□□□□ -1.36
TPM4P67936 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.53□□□□□ -1.36
TPM4P67936 TRIM60P16-201ENST00000444048 694 ntBASIC6.53□□□□□ -1.36
TPM4P67936 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.53□□□□□ -1.36
TPM4P67936 AP003385.3-201ENST00000472498 287 ntBASIC6.53□□□□□ -1.36
TPM4P67936 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.53□□□□□ -1.36
TPM4P67936 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.53□□□□□ -1.36
TPM4P67936 AC015524.1-201ENST00000491585 472 ntBASIC6.53□□□□□ -1.36
TPM4P67936 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TPM4P67936 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.53□□□□□ -1.36
TPM4P67936 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TPM4P67936 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.53□□□□□ -1.36
TPM4P67936 AL512430.4-201ENST00000603085 613 ntBASIC6.53□□□□□ -1.36
TPM4P67936 Z93930.3-201ENST00000607919 749 ntBASIC6.53□□□□□ -1.36
TPM4P67936 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TPM4P67936 AL034546.1-201ENST00000623740 3693 ntBASIC6.53□□□□□ -1.36
TPM4P67936 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TPM4P67936 AC119674.1-202ENST00000641333 1860 ntBASIC6.53□□□□□ -1.36
TPM4P67936 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TPM4P67936 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
TPM4P67936 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.36
TPM4P67936 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.36
TPM4P67936 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.52□□□□□ -1.36
TPM4P67936 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.52□□□□□ -1.36
TPM4P67936 AL022322.2-201ENST00000624072 20397 ntBASIC6.52□□□□□ -1.37
TPM4P67936 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.52□□□□□ -1.37
TPM4P67936 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TPM4P67936 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TPM4P67936 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.52□□□□□ -1.37
TPM4P67936 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
TPM4P67936 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
TPM4P67936 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TPM4P67936 AL137058.3-201ENST00000624531 3099 ntBASIC6.52□□□□□ -1.37
TPM4P67936 MAPK10-338ENST00000641647 3362 ntBASIC6.52□□□□□ -1.37
TPM4P67936 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TPM4P67936 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.52□□□□□ -1.37
TPM4P67936 RNA5SP91-201ENST00000390902 119 ntBASIC6.52□□□□□ -1.37
TPM4P67936 PRELID1P1-201ENST00000403549 660 ntBASIC6.52□□□□□ -1.37
TPM4P67936 AL139805.1-201ENST00000407837 289 ntBASIC6.52□□□□□ -1.37
TPM4P67936 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TPM4P67936 OR10T1P-201ENST00000424327 947 ntBASIC6.52□□□□□ -1.37
TPM4P67936 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TPM4P67936 RPSAP65-201ENST00000429660 595 ntBASIC6.52□□□□□ -1.37
TPM4P67936 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.52□□□□□ -1.37
TPM4P67936 RPS7P3-201ENST00000443360 580 ntBASIC6.52□□□□□ -1.37
TPM4P67936 AL445991.1-201ENST00000450381 475 ntBASIC6.52□□□□□ -1.37
TPM4P67936 AC002553.3-201ENST00000453002 341 ntBASIC6.52□□□□□ -1.37
TPM4P67936 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC6.52□□□□□ -1.37
TPM4P67936 MORF4L2P1-201ENST00000503761 858 ntBASIC6.52□□□□□ -1.37
TPM4P67936 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.52□□□□□ -1.37
TPM4P67936 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.52□□□□□ -1.37
TPM4P67936 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.52□□□□□ -1.37
TPM4P67936 GAPDHP62-201ENST00000515313 990 ntBASIC6.52□□□□□ -1.37
TPM4P67936 AC110056.1-201ENST00000525759 911 ntBASIC6.52□□□□□ -1.37
TPM4P67936 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.52□□□□□ -1.37
TPM4P67936 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.52□□□□□ -1.37
TPM4P67936 TXNP4-201ENST00000575018 310 ntBASIC6.52□□□□□ -1.37
TPM4P67936 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.52□□□□□ -1.37
TPM4P67936 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.52□□□□□ -1.37
TPM4P67936 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.52□□□□□ -1.37
TPM4P67936 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TPM4P67936 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
TPM4P67936 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
TPM4P67936 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.52□□□□□ -1.37
TPM4P67936 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TPM4P67936 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TPM4P67936 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TPM4P67936 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM4P67936 AP004607.3-201ENST00000530354 3915 ntBASIC6.51□□□□□ -1.37
TPM4P67936 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM4P67936 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
TPM4P67936 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TPM4P67936 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM4P67936 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM4P67936 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM4P67936 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM4P67936 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.51□□□□□ -1.37
TPM4P67936 RN7SKP78-201ENST00000364711 318 ntBASIC6.51□□□□□ -1.37
TPM4P67936 RNU1-136P-201ENST00000384181 164 ntBASIC6.51□□□□□ -1.37
TPM4P67936 MIR27A-201ENST00000385073 78 ntBASIC6.51□□□□□ -1.37
TPM4P67936 AC121334.1-201ENST00000396414 802 ntBASIC6.51□□□□□ -1.37
TPM4P67936 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.51□□□□□ -1.37
TPM4P67936 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM4P67936 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
TPM4P67936 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TPM4P67936 RN7SL502P-201ENST00000481857 290 ntBASIC6.51□□□□□ -1.37
TPM4P67936 AC008629.2-201ENST00000503783 483 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms