Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SBDSP1-204ENST00000453858 737 ntBASIC6.78□□□□□ -1.32
HMGCS2P54868 AC011225.1-201ENST00000457751 369 ntBASIC6.78□□□□□ -1.32
HMGCS2P54868 RPL35AP19-201ENST00000469425 329 ntBASIC6.78□□□□□ -1.32
HMGCS2P54868 COPS8P2-201ENST00000473228 627 ntBASIC6.78□□□□□ -1.32
HMGCS2P54868 RN7SL165P-201ENST00000477476 291 ntBASIC6.78□□□□□ -1.32
HMGCS2P54868 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.78□□□□□ -1.32
HMGCS2P54868 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.78□□□□□ -1.32
HMGCS2P54868 AC027334.1-201ENST00000603257 310 ntBASIC6.78□□□□□ -1.32
HMGCS2P54868 AL049840.6-202ENST00000603373 279 ntBASIC6.78□□□□□ -1.32
HMGCS2P54868 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.78□□□□□ -1.32
HMGCS2P54868 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.78□□□□□ -1.32
HMGCS2P54868 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.78□□□□□ -1.32
HMGCS2P54868 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.78□□□□□ -1.32
HMGCS2P54868 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMGCS2P54868 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMGCS2P54868 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMGCS2P54868 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HMGCS2P54868 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.78□□□□□ -1.32
HMGCS2P54868 AC241584.2-201ENST00000637142 2090 ntBASIC6.78□□□□□ -1.32
HMGCS2P54868 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HMGCS2P54868 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HMGCS2P54868 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HMGCS2P54868 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.32
HMGCS2P54868 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.77□□□□□ -1.32
HMGCS2P54868 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.77□□□□□ -1.32
HMGCS2P54868 AC109780.1-201ENST00000451768 1344 ntBASIC6.77□□□□□ -1.32
HMGCS2P54868 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
HMGCS2P54868 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGCS2P54868 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGCS2P54868 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.77□□□□□ -1.33
HMGCS2P54868 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGCS2P54868 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
HMGCS2P54868 GTF2IP4-201ENST00000453092 2054 ntBASIC6.77□□□□□ -1.33
HMGCS2P54868 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HMGCS2P54868 AC009831.5-201ENST00000624000 3189 ntBASIC6.77□□□□□ -1.33
HMGCS2P54868 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HMGCS2P54868 GAPDHP24-201ENST00000328713 983 ntBASIC6.77□□□□□ -1.33
HMGCS2P54868 SPTLC1P2-201ENST00000407089 121 ntBASIC6.77□□□□□ -1.33
HMGCS2P54868 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.77□□□□□ -1.33
HMGCS2P54868 AC007562.1-201ENST00000421819 517 ntBASIC6.77□□□□□ -1.33
HMGCS2P54868 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.77□□□□□ -1.33
HMGCS2P54868 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.77□□□□□ -1.33
HMGCS2P54868 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.77□□□□□ -1.33
HMGCS2P54868 AC023274.2-201ENST00000445264 521 ntBASIC6.77□□□□□ -1.33
HMGCS2P54868 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.77□□□□□ -1.33
HMGCS2P54868 AC006539.1-201ENST00000481419 501 ntBASIC6.77□□□□□ -1.33
HMGCS2P54868 RPL32P9-201ENST00000487963 407 ntBASIC6.77□□□□□ -1.33
HMGCS2P54868 RN7SL547P-201ENST00000490793 290 ntBASIC6.77□□□□□ -1.33
HMGCS2P54868 AC002456.2-201ENST00000509356 380 ntBASIC6.77□□□□□ -1.33
HMGCS2P54868 OR4A40P-201ENST00000533878 948 ntBASIC6.77□□□□□ -1.33
HMGCS2P54868 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HMGCS2P54868 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
HMGCS2P54868 AC092944.2-201ENST00000605443 889 ntBASIC6.77□□□□□ -1.33
HMGCS2P54868 AL359513.1-201ENST00000614364 557 ntBASIC6.77□□□□□ -1.33
HMGCS2P54868 AC004808.2-201ENST00000627965 773 ntBASIC6.77□□□□□ -1.33
HMGCS2P54868 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.77□□□□□ -1.33
HMGCS2P54868 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.77□□□□□ -1.33
HMGCS2P54868 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.77□□□□□ -1.33
HMGCS2P54868 CASC19-248ENST00000641674 1356 ntBASIC6.77□□□□□ -1.33
HMGCS2P54868 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGCS2P54868 AC092821.2-201ENST00000545710 2042 ntBASIC6.77□□□□□ -1.33
HMGCS2P54868 DOCK11P1-201ENST00000553480 5932 ntBASIC6.77□□□□□ -1.33
HMGCS2P54868 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGCS2P54868 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.77□□□□□ -1.33
HMGCS2P54868 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HMGCS2P54868 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.77□□□□□ -1.33
HMGCS2P54868 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HMGCS2P54868 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
HMGCS2P54868 AC089998.1-201ENST00000548575 3141 ntBASIC6.76□□□□□ -1.33
HMGCS2P54868 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.76□□□□□ -1.33
HMGCS2P54868 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGCS2P54868 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.76□□□□□ -1.33
HMGCS2P54868 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.76□□□□□ -1.33
HMGCS2P54868 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
HMGCS2P54868 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.76□□□□□ -1.33
HMGCS2P54868 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.76□□□□□ -1.33
HMGCS2P54868 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.76□□□□□ -1.33
HMGCS2P54868 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HMGCS2P54868 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGCS2P54868 RNU1-19P-201ENST00000363306 165 ntBASIC6.76□□□□□ -1.33
HMGCS2P54868 SNORA74A-201ENST00000364089 198 ntBASIC6.76□□□□□ -1.33
HMGCS2P54868 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.76□□□□□ -1.33
HMGCS2P54868 MIR937-201ENST00000401271 86 ntBASIC6.76□□□□□ -1.33
HMGCS2P54868 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.76□□□□□ -1.33
HMGCS2P54868 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.76□□□□□ -1.33
HMGCS2P54868 AP000534.2-201ENST00000412729 568 ntBASIC6.76□□□□□ -1.33
HMGCS2P54868 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.76□□□□□ -1.33
HMGCS2P54868 CUBNP2-201ENST00000443534 1139 ntBASIC6.76□□□□□ -1.33
HMGCS2P54868 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.76□□□□□ -1.33
HMGCS2P54868 AC021678.3-201ENST00000517893 476 ntBASIC6.76□□□□□ -1.33
HMGCS2P54868 AC067852.5-201ENST00000589299 310 ntBASIC6.76□□□□□ -1.33
HMGCS2P54868 FKBP1AP1-201ENST00000594588 318 ntBASIC6.76□□□□□ -1.33
HMGCS2P54868 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.76□□□□□ -1.33
HMGCS2P54868 BNIP3P32-201ENST00000600015 554 ntBASIC6.76□□□□□ -1.33
HMGCS2P54868 AC008536.1-201ENST00000602872 669 ntBASIC6.76□□□□□ -1.33
HMGCS2P54868 AC091193.1-201ENST00000604640 448 ntBASIC6.76□□□□□ -1.33
HMGCS2P54868 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.76□□□□□ -1.33
HMGCS2P54868 AL390318.1-201ENST00000624564 687 ntBASIC6.76□□□□□ -1.33
HMGCS2P54868 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.76□□□□□ -1.33
HMGCS2P54868 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms