Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC244502.2-201ENST00000543361 851 ntBASIC6.31□□□□□ -1.4
PTPN9P43378 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.31□□□□□ -1.4
PTPN9P43378 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PTPN9P43378 AC092332.1-201ENST00000563684 829 ntBASIC6.31□□□□□ -1.4
PTPN9P43378 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC6.31□□□□□ -1.4
PTPN9P43378 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.31□□□□□ -1.4
PTPN9P43378 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.31□□□□□ -1.4
PTPN9P43378 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.31□□□□□ -1.4
PTPN9P43378 AC068768.2-201ENST00000602352 343 ntBASIC6.31□□□□□ -1.4
PTPN9P43378 AC006213.4-201ENST00000616184 634 ntBASIC6.31□□□□□ -1.4
PTPN9P43378 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.31□□□□□ -1.4
PTPN9P43378 AL591926.1-201ENST00000620542 217 ntBASIC6.31□□□□□ -1.4
PTPN9P43378 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.31□□□□□ -1.4
PTPN9P43378 AC005725.1-201ENST00000577346 2607 ntBASIC6.31□□□□□ -1.4
PTPN9P43378 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
PTPN9P43378 HSPD1P9-201ENST00000420325 1636 ntBASIC6.31□□□□□ -1.4
PTPN9P43378 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.31□□□□□ -1.4
PTPN9P43378 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PTPN9P43378 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN9P43378 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN9P43378 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN9P43378 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN9P43378 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.31□□□□□ -1.4
PTPN9P43378 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PTPN9P43378 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTPN9P43378 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTPN9P43378 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.3□□□□□ -1.4
PTPN9P43378 MTCO1P28-201ENST00000574177 1528 ntBASIC6.3□□□□□ -1.4
PTPN9P43378 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
PTPN9P43378 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PTPN9P43378 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTPN9P43378 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTPN9P43378 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTPN9P43378 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.3□□□□□ -1.4
PTPN9P43378 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PTPN9P43378 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PTPN9P43378 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.3□□□□□ -1.4
PTPN9P43378 OR10R3P-201ENST00000361688 942 ntBASIC6.3□□□□□ -1.4
PTPN9P43378 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.3□□□□□ -1.4
PTPN9P43378 MT-RNR1-201ENST00000389680 954 ntBASIC6.3□□□□□ -1.4
PTPN9P43378 AL096800.1-201ENST00000405326 893 ntBASIC6.3□□□□□ -1.4
PTPN9P43378 MIR1275-201ENST00000408770 80 ntBASIC6.3□□□□□ -1.4
PTPN9P43378 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.3□□□□□ -1.4
PTPN9P43378 AL353662.1-201ENST00000439099 327 ntBASIC6.3□□□□□ -1.4
PTPN9P43378 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.3□□□□□ -1.4
PTPN9P43378 OR6C72P-201ENST00000451403 892 ntBASIC6.3□□□□□ -1.4
PTPN9P43378 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.3□□□□□ -1.4
PTPN9P43378 PRMT5P1-201ENST00000514351 598 ntBASIC6.3□□□□□ -1.4
PTPN9P43378 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PTPN9P43378 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.3□□□□□ -1.4
PTPN9P43378 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.3□□□□□ -1.4
PTPN9P43378 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.3□□□□□ -1.4
PTPN9P43378 MIR4502-201ENST00000580432 81 ntBASIC6.3□□□□□ -1.4
PTPN9P43378 AC073333.2-201ENST00000603589 769 ntBASIC6.3□□□□□ -1.4
PTPN9P43378 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.3□□□□□ -1.4
PTPN9P43378 AC092681.3-201ENST00000609463 678 ntBASIC6.3□□□□□ -1.4
PTPN9P43378 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.3□□□□□ -1.4
PTPN9P43378 AL136097.3-201ENST00000611097 505 ntBASIC6.3□□□□□ -1.4
PTPN9P43378 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTPN9P43378 MIR6806-201ENST00000622141 64 ntBASIC6.3□□□□□ -1.4
PTPN9P43378 AL356094.1-201ENST00000624663 1212 ntBASIC6.3□□□□□ -1.4
PTPN9P43378 AC004808.2-201ENST00000627965 773 ntBASIC6.3□□□□□ -1.4
PTPN9P43378 HPVC1-201ENST00000629899 1198 ntBASIC6.3□□□□□ -1.4
PTPN9P43378 AC073488.3-201ENST00000631611 778 ntBASIC6.3□□□□□ -1.4
PTPN9P43378 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.3□□□□□ -1.4
PTPN9P43378 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTPN9P43378 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
PTPN9P43378 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.3□□□□□ -1.4
PTPN9P43378 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.3□□□□□ -1.4
PTPN9P43378 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.3□□□□□ -1.4
PTPN9P43378 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PTPN9P43378 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN9P43378 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN9P43378 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN9P43378 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN9P43378 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN9P43378 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN9P43378 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN9P43378 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.29□□□□□ -1.4
PTPN9P43378 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN9P43378 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN9P43378 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN9P43378 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.29□□□□□ -1.4
PTPN9P43378 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN9P43378 SNORA51.9-201ENST00000384295 124 ntBASIC6.29□□□□□ -1.4
PTPN9P43378 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.29□□□□□ -1.4
PTPN9P43378 AC013268.2-201ENST00000420753 337 ntBASIC6.29□□□□□ -1.4
PTPN9P43378 NMD3P2-201ENST00000421815 761 ntBASIC6.29□□□□□ -1.4
PTPN9P43378 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.29□□□□□ -1.4
PTPN9P43378 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.29□□□□□ -1.4
PTPN9P43378 AL365220.1-201ENST00000432923 399 ntBASIC6.29□□□□□ -1.4
PTPN9P43378 PNKDP1-201ENST00000435914 430 ntBASIC6.29□□□□□ -1.4
PTPN9P43378 CUBNP2-201ENST00000443534 1139 ntBASIC6.29□□□□□ -1.4
PTPN9P43378 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN9P43378 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.29□□□□□ -1.4
PTPN9P43378 GNL2P1-201ENST00000451274 2190 ntBASIC6.29□□□□□ -1.4
PTPN9P43378 SDC4P-201ENST00000453285 601 ntBASIC6.29□□□□□ -1.4
PTPN9P43378 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.29□□□□□ -1.4
PTPN9P43378 AL049634.1-201ENST00000453770 1720 ntBASIC6.29□□□□□ -1.4
PTPN9P43378 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms