Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SHC1P29353 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.45□□□□□ -1.54
SHC1P29353 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHC1P29353 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
SHC1P29353 MTCO1P28-201ENST00000574177 1528 ntBASIC5.45□□□□□ -1.54
SHC1P29353 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.45□□□□□ -1.54
SHC1P29353 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.45□□□□□ -1.54
SHC1P29353 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHC1P29353 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
SHC1P29353 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.45□□□□□ -1.54
SHC1P29353 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHC1P29353 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHC1P29353 RN7SKP17-201ENST00000411242 351 ntBASIC5.45□□□□□ -1.54
SHC1P29353 AC245096.1-201ENST00000413104 546 ntBASIC5.45□□□□□ -1.54
SHC1P29353 AL354890.1-201ENST00000413730 346 ntBASIC5.45□□□□□ -1.54
SHC1P29353 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.45□□□□□ -1.54
SHC1P29353 PTCD2P2-201ENST00000415579 1095 ntBASIC5.45□□□□□ -1.54
SHC1P29353 NME1P1-201ENST00000420914 382 ntBASIC5.45□□□□□ -1.54
SHC1P29353 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
SHC1P29353 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.45□□□□□ -1.54
SHC1P29353 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.45□□□□□ -1.54
SHC1P29353 AC009963.4-201ENST00000448535 339 ntBASIC5.45□□□□□ -1.54
SHC1P29353 AC016027.4-201ENST00000450866 277 ntBASIC5.45□□□□□ -1.54
SHC1P29353 AC009963.3-201ENST00000458090 486 ntBASIC5.45□□□□□ -1.54
SHC1P29353 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.45□□□□□ -1.54
SHC1P29353 AC068228.1-201ENST00000461723 211 ntBASIC5.45□□□□□ -1.54
SHC1P29353 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SHC1P29353 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHC1P29353 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.45□□□□□ -1.54
SHC1P29353 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.45□□□□□ -1.54
SHC1P29353 AC090826.1-203ENST00000569235 490 ntBASIC5.45□□□□□ -1.54
SHC1P29353 AP005119.1-201ENST00000580956 292 ntBASIC5.45□□□□□ -1.54
SHC1P29353 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.45□□□□□ -1.54
SHC1P29353 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.45□□□□□ -1.54
SHC1P29353 AL157762.1-201ENST00000619612 415 ntBASIC5.45□□□□□ -1.54
SHC1P29353 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SHC1P29353 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHC1P29353 DNM1P47-203ENST00000571780 12667 ntBASIC5.45□□□□□ -1.54
SHC1P29353 AL049634.1-201ENST00000453770 1720 ntBASIC5.45□□□□□ -1.54
SHC1P29353 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHC1P29353 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHC1P29353 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SHC1P29353 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHC1P29353 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SHC1P29353 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SHC1P29353 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.44□□□□□ -1.54
SHC1P29353 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.44□□□□□ -1.54
SHC1P29353 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHC1P29353 AC004656.1-201ENST00000568479 4951 ntBASIC5.44□□□□□ -1.54
SHC1P29353 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHC1P29353 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHC1P29353 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHC1P29353 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
SHC1P29353 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHC1P29353 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
SHC1P29353 OR10R3P-201ENST00000361688 942 ntBASIC5.44□□□□□ -1.54
SHC1P29353 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SHC1P29353 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHC1P29353 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHC1P29353 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHC1P29353 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.44□□□□□ -1.54
SHC1P29353 AC115283.1-201ENST00000427353 400 ntBASIC5.44□□□□□ -1.54
SHC1P29353 AC069154.1-201ENST00000432914 542 ntBASIC5.44□□□□□ -1.54
SHC1P29353 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SHC1P29353 ATP5LP2-201ENST00000440646 311 ntBASIC5.44□□□□□ -1.54
SHC1P29353 RPL6P30-201ENST00000443382 862 ntBASIC5.44□□□□□ -1.54
SHC1P29353 OR52E7P-201ENST00000452394 933 ntBASIC5.44□□□□□ -1.54
SHC1P29353 CST12P-201ENST00000457644 362 ntBASIC5.44□□□□□ -1.54
SHC1P29353 AC007688.1-201ENST00000475592 759 ntBASIC5.44□□□□□ -1.54
SHC1P29353 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.44□□□□□ -1.54
SHC1P29353 AC093719.1-201ENST00000480427 441 ntBASIC5.44□□□□□ -1.54
SHC1P29353 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.44□□□□□ -1.54
SHC1P29353 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.44□□□□□ -1.54
SHC1P29353 EIF4EP5-201ENST00000528228 640 ntBASIC5.44□□□□□ -1.54
SHC1P29353 AC130360.2-201ENST00000533477 1556 ntBASIC5.44□□□□□ -1.54
SHC1P29353 AC079905.1-201ENST00000549280 475 ntBASIC5.44□□□□□ -1.54
SHC1P29353 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.44□□□□□ -1.54
SHC1P29353 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SHC1P29353 AC008507.3-201ENST00000585753 472 ntBASIC5.44□□□□□ -1.54
SHC1P29353 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SHC1P29353 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.44□□□□□ -1.54
SHC1P29353 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.44□□□□□ -1.54
SHC1P29353 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SHC1P29353 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SHC1P29353 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHC1P29353 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHC1P29353 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHC1P29353 AL449283.1-201ENST00000602631 3403 ntBASIC5.43□□□□□ -1.54
SHC1P29353 AC016583.1-201ENST00000624221 2431 ntBASIC5.43□□□□□ -1.54
SHC1P29353 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHC1P29353 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHC1P29353 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHC1P29353 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHC1P29353 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SHC1P29353 RNFT1P3-201ENST00000340898 1052 ntBASIC5.43□□□□□ -1.54
SHC1P29353 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.43□□□□□ -1.54
SHC1P29353 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.43□□□□□ -1.54
SHC1P29353 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SHC1P29353 RN7SKP240-201ENST00000410583 375 ntBASIC5.43□□□□□ -1.54
SHC1P29353 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms