Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TNFSF4P23510 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC5.82□□□□□ -1.48
TNFSF4P23510 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 AL034546.1-201ENST00000623740 3693 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
TNFSF4P23510 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.82□□□□□ -1.48
TNFSF4P23510 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TNFSF4P23510 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TNFSF4P23510 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TNFSF4P23510 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
TNFSF4P23510 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.81□□□□□ -1.48
TNFSF4P23510 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFSF4P23510 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TNFSF4P23510 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFSF4P23510 AL512329.1-201ENST00000404600 1592 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFSF4P23510 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFSF4P23510 GMFG-201ENST00000253054 616 ntTSL 5 BASIC5.81□□□□□ -1.48
TNFSF4P23510 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFSF4P23510 FUNDC2P3-201ENST00000334716 533 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 RNA5SP152-201ENST00000365184 110 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
TNFSF4P23510 RNU6-298P-201ENST00000390888 96 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 RN7SKP271-201ENST00000410528 320 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 AC013404.1-201ENST00000413068 249 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFSF4P23510 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFSF4P23510 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFSF4P23510 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFSF4P23510 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFSF4P23510 AC114973.1-201ENST00000429057 632 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC5.81□□□□□ -1.48
TNFSF4P23510 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.81□□□□□ -1.48
TNFSF4P23510 AP000936.3-201ENST00000438127 255 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 AC004854.1-201ENST00000440356 349 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFSF4P23510 HSFY3P-201ENST00000444242 1191 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFSF4P23510 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.81□□□□□ -1.48
TNFSF4P23510 AL035407.2-201ENST00000454090 378 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 TPT1P1-201ENST00000458495 518 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 AC104164.3-201ENST00000467363 1258 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 AC104687.1-201ENST00000485829 412 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 EIF1P7-201ENST00000487533 337 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.81□□□□□ -1.48
TNFSF4P23510 UBE2V1P12-201ENST00000503954 474 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TNFSF4P23510 AC017007.1-201ENST00000511960 415 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFSF4P23510 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
TNFSF4P23510 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFSF4P23510 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFSF4P23510 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFSF4P23510 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.81□□□□□ -1.48
TNFSF4P23510 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.81□□□□□ -1.48
TNFSF4P23510 AC022884.3-201ENST00000579571 248 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 RN7SL270P-201ENST00000579643 281 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 RN7SL622P-201ENST00000585292 275 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TNFSF4P23510 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.81□□□□□ -1.48
TNFSF4P23510 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFSF4P23510 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.81□□□□□ -1.48
TNFSF4P23510 PTCHD3P1-201ENST00000612350 537 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 AC010333.3-201ENST00000615100 402 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 SAMMSON-209ENST00000641222 1100 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
TNFSF4P23510 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TNFSF4P23510 AC020658.2-201ENST00000559030 4020 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC5.81□□□□□ -1.48
TNFSF4P23510 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.81□□□□□ -1.48
TNFSF4P23510 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFSF4P23510 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TNFSF4P23510 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFSF4P23510 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFSF4P23510 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFSF4P23510 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
TNFSF4P23510 AC133552.1-201ENST00000569988 4007 ntBASIC5.81□□□□□ -1.48
TNFSF4P23510 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
TNFSF4P23510 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFSF4P23510 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
TNFSF4P23510 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.8□□□□□ -1.48
TNFSF4P23510 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TNFSF4P23510 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.8□□□□□ -1.48
TNFSF4P23510 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TNFSF4P23510 SNX18P3-202ENST00000565670 1750 ntBASIC5.8□□□□□ -1.48
TNFSF4P23510 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.8□□□□□ -1.48
TNFSF4P23510 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
TNFSF4P23510 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.8□□□□□ -1.48
TNFSF4P23510 AP000547.3-204ENST00000588548 2523 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms