Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MTND4P18-201ENST00000447010 465 ntBASIC8.1□□□□□ -1.11
RFX1P22670 HMGB1P16-201ENST00000447155 540 ntBASIC8.1□□□□□ -1.11
RFX1P22670 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RFX1P22670 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RFX1P22670 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC8.1□□□□□ -1.11
RFX1P22670 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC8.1□□□□□ -1.11
RFX1P22670 RPS4XP19-201ENST00000460237 736 ntBASIC8.1□□□□□ -1.11
RFX1P22670 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC8.1□□□□□ -1.11
RFX1P22670 AC117395.1-201ENST00000487390 403 ntBASIC8.1□□□□□ -1.11
RFX1P22670 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC8.1□□□□□ -1.11
RFX1P22670 AC147055.4-201ENST00000504399 745 ntBASIC8.1□□□□□ -1.11
RFX1P22670 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC8.1□□□□□ -1.11
RFX1P22670 AC091965.2-201ENST00000512324 613 ntBASIC8.1□□□□□ -1.11
RFX1P22670 AC106038.2-201ENST00000520706 568 ntBASIC8.1□□□□□ -1.11
RFX1P22670 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC8.1□□□□□ -1.11
RFX1P22670 AC109635.6-201ENST00000525487 1113 ntBASIC8.1□□□□□ -1.11
RFX1P22670 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC8.1□□□□□ -1.11
RFX1P22670 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC8.1□□□□□ -1.11
RFX1P22670 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
RFX1P22670 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC8.1□□□□□ -1.11
RFX1P22670 AC013283.1-201ENST00000557282 492 ntBASIC8.1□□□□□ -1.11
RFX1P22670 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC8.1□□□□□ -1.11
RFX1P22670 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC8.1□□□□□ -1.11
RFX1P22670 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC8.1□□□□□ -1.11
RFX1P22670 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC8.1□□□□□ -1.11
RFX1P22670 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC8.1□□□□□ -1.11
RFX1P22670 EIF1P6-201ENST00000600054 334 ntBASIC8.1□□□□□ -1.11
RFX1P22670 AC079089.3-201ENST00000603094 673 ntBASIC8.1□□□□□ -1.11
RFX1P22670 AP001554.1-201ENST00000604533 376 ntBASIC8.1□□□□□ -1.11
RFX1P22670 AC018714.1-201ENST00000605028 208 ntBASIC8.1□□□□□ -1.11
RFX1P22670 AC103724.4-201ENST00000605981 292 ntBASIC8.1□□□□□ -1.11
RFX1P22670 AP002360.4-201ENST00000606980 481 ntBASIC8.1□□□□□ -1.11
RFX1P22670 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC8.1□□□□□ -1.11
RFX1P22670 AL355073.2-201ENST00000612106 557 ntBASIC8.1□□□□□ -1.11
RFX1P22670 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC8.1□□□□□ -1.11
RFX1P22670 AC127502.3-201ENST00000636170 1206 ntBASIC8.1□□□□□ -1.11
RFX1P22670 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
RFX1P22670 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC8.1□□□□□ -1.11
RFX1P22670 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC8.1□□□□□ -1.11
RFX1P22670 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RFX1P22670 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RFX1P22670 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.1□□□□□ -1.11
RFX1P22670 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RFX1P22670 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RFX1P22670 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RFX1P22670 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RFX1P22670 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8.1□□□□□ -1.11
RFX1P22670 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 ARHGAP42P4-201ENST00000549782 2934 ntBASIC8.09□□□□□ -1.11
RFX1P22670 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
RFX1P22670 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.09□□□□□ -1.11
RFX1P22670 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC8.09□□□□□ -1.11
RFX1P22670 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 AL139805.2-201ENST00000455305 2433 ntBASIC8.09□□□□□ -1.11
RFX1P22670 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
RFX1P22670 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC8.09□□□□□ -1.11
RFX1P22670 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
RFX1P22670 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 NF1P8-201ENST00000415351 1461 ntBASIC8.09□□□□□ -1.11
RFX1P22670 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
RFX1P22670 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RFX1P22670 Y_RNA.3-201ENST00000362331 103 ntBASIC8.09□□□□□ -1.11
RFX1P22670 RNA5SP429-201ENST00000363688 109 ntBASIC8.09□□□□□ -1.11
RFX1P22670 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RFX1P22670 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 VDAC2P1-201ENST00000399358 958 ntBASIC8.09□□□□□ -1.11
RFX1P22670 TANK-206ENST00000406287 875 ntTSL 5 BASIC8.09□□□□□ -1.11
RFX1P22670 RN7SKP225-201ENST00000410405 352 ntBASIC8.09□□□□□ -1.11
RFX1P22670 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 VDAC1P2-201ENST00000423609 850 ntBASIC8.09□□□□□ -1.11
RFX1P22670 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 RPL23AP4-201ENST00000427757 463 ntBASIC8.09□□□□□ -1.11
RFX1P22670 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC8.09□□□□□ -1.11
RFX1P22670 MTND1P4-201ENST00000435196 415 ntBASIC8.09□□□□□ -1.11
RFX1P22670 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC8.09□□□□□ -1.11
RFX1P22670 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC8.09□□□□□ -1.11
RFX1P22670 MRPS21P1-201ENST00000453850 223 ntBASIC8.09□□□□□ -1.11
RFX1P22670 AC093899.1-201ENST00000457984 376 ntBASIC8.09□□□□□ -1.11
RFX1P22670 RPL7P16-201ENST00000479738 738 ntBASIC8.09□□□□□ -1.11
RFX1P22670 AC098583.1-201ENST00000480875 255 ntBASIC8.09□□□□□ -1.11
RFX1P22670 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.09□□□□□ -1.11
RFX1P22670 RPS23-208ENST00000512493 443 ntTSL 3 BASIC8.09□□□□□ -1.11
RFX1P22670 LECT2-203ENST00000512872 762 ntTSL 5 BASIC8.09□□□□□ -1.11
RFX1P22670 SNX18P27-201ENST00000523611 779 ntBASIC8.09□□□□□ -1.11
RFX1P22670 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC8.09□□□□□ -1.11
RFX1P22670 AC005832.3-201ENST00000537929 631 ntBASIC8.09□□□□□ -1.11
RFX1P22670 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC8.09□□□□□ -1.11
RFX1P22670 AC004825.1-201ENST00000555068 586 ntBASIC8.09□□□□□ -1.11
RFX1P22670 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC8.09□□□□□ -1.11
RFX1P22670 AC044860.3-201ENST00000559957 368 ntBASIC8.09□□□□□ -1.11
RFX1P22670 NIFKP8-201ENST00000560500 874 ntBASIC8.09□□□□□ -1.11
RFX1P22670 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms