Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.66□□□□□ -1.34
COL6A2P12110 AL589880.1-201ENST00000448271 287 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC6.66□□□□□ -1.34
COL6A2P12110 SRP68P2-201ENST00000456184 254 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 RPSAP39-201ENST00000467439 883 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.66□□□□□ -1.34
COL6A2P12110 MTND2P14-201ENST00000482139 351 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.66□□□□□ -1.34
COL6A2P12110 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.66□□□□□ -1.34
COL6A2P12110 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC6.66□□□□□ -1.34
COL6A2P12110 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
COL6A2P12110 SNX18P23-201ENST00000510867 677 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 AC139713.1-202ENST00000512366 460 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 SNORA3.4-201ENST00000515969 96 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 RNA5SP318-201ENST00000516352 92 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 OR8I1P-201ENST00000529291 931 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.66□□□□□ -1.34
COL6A2P12110 OR52K3P-201ENST00000531655 943 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 GCSHP4-201ENST00000538792 439 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC6.66□□□□□ -1.34
COL6A2P12110 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.66□□□□□ -1.34
COL6A2P12110 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.66□□□□□ -1.34
COL6A2P12110 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.66□□□□□ -1.34
COL6A2P12110 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.66□□□□□ -1.34
COL6A2P12110 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC6.66□□□□□ -1.34
COL6A2P12110 AL109653.1-201ENST00000603091 248 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 AL158042.1-201ENST00000605338 460 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 AC096586.1-201ENST00000610267 561 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 AC092106.3-201ENST00000611308 722 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 AC013470.4-201ENST00000619978 986 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.66□□□□□ -1.34
COL6A2P12110 OR8G3P-202ENST00000641572 1255 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.66□□□□□ -1.34
COL6A2P12110 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
COL6A2P12110 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
COL6A2P12110 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
COL6A2P12110 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.66□□□□□ -1.34
COL6A2P12110 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.66□□□□□ -1.34
COL6A2P12110 AL356317.1-201ENST00000396110 1436 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 AC009779.8-201ENST00000641684 4384 ntBASIC6.66□□□□□ -1.34
COL6A2P12110 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL6A2P12110 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
COL6A2P12110 AC011504.1-201ENST00000623331 4103 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL6A2P12110 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL6A2P12110 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL6A2P12110 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL6A2P12110 AC062022.1-201ENST00000451026 1684 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
COL6A2P12110 AC074141.1-201ENST00000588129 2995 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.65□□□□□ -1.34
COL6A2P12110 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.65□□□□□ -1.34
COL6A2P12110 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL6A2P12110 AC023886.2-201ENST00000321285 411 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL6A2P12110 RNU1-55P-201ENST00000365510 158 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.65□□□□□ -1.34
COL6A2P12110 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL6A2P12110 AL049697.3-201ENST00000406493 982 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 RN7SKP278-201ENST00000410504 342 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 RN7SKP182-201ENST00000410772 298 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC6.65□□□□□ -1.34
COL6A2P12110 RPS3AP37-201ENST00000419176 745 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC6.65□□□□□ -1.34
COL6A2P12110 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.65□□□□□ -1.34
COL6A2P12110 PNRC2P1-201ENST00000423940 420 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.65□□□□□ -1.34
COL6A2P12110 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.65□□□□□ -1.34
COL6A2P12110 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.65□□□□□ -1.34
COL6A2P12110 RAP1BP2-201ENST00000478270 544 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 AC093719.1-201ENST00000480427 441 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 AC126121.1-201ENST00000482313 553 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 AC092824.1-201ENST00000483524 576 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 RPS12P31-201ENST00000491419 398 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.65□□□□□ -1.34
COL6A2P12110 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
COL6A2P12110 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL6A2P12110 Y_RNA.655-201ENST00000515919 96 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.65□□□□□ -1.34
COL6A2P12110 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.65□□□□□ -1.34
COL6A2P12110 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.65□□□□□ -1.34
COL6A2P12110 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.65□□□□□ -1.34
COL6A2P12110 AP003080.1-202ENST00000526526 915 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.65□□□□□ -1.34
COL6A2P12110 AP002004.1-206ENST00000532441 876 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 SSU72P6-201ENST00000532644 488 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.65□□□□□ -1.34
COL6A2P12110 AL049830.4-201ENST00000555149 351 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 MIR1273F-201ENST00000580581 99 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.65□□□□□ -1.34
COL6A2P12110 AC002069.2-201ENST00000603580 883 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms