Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MIR7703-201ENST00000620784 77 ntBASIC10.05□□□□□ -0.8
CUX2O14529 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC10.05□□□□□ -0.8
CUX2O14529 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CUX2O14529 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
CUX2O14529 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC10.05□□□□□ -0.8
CUX2O14529 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
CUX2O14529 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC10.05□□□□□ -0.8
CUX2O14529 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CUX2O14529 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC10.05□□□□□ -0.8
CUX2O14529 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CUX2O14529 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CUX2O14529 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CUX2O14529 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
CUX2O14529 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC10.05□□□□□ -0.8
CUX2O14529 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
CUX2O14529 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CUX2O14529 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CUX2O14529 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC10.05□□□□□ -0.8
CUX2O14529 PARP4P2-201ENST00000446672 3326 ntBASIC10.05□□□□□ -0.8
CUX2O14529 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
CUX2O14529 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CUX2O14529 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
CUX2O14529 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CUX2O14529 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CUX2O14529 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CUX2O14529 AC137056.2-201ENST00000624055 1958 ntBASIC10.04□□□□□ -0.8
CUX2O14529 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC10.04□□□□□ -0.8
CUX2O14529 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC10.04□□□□□ -0.8
CUX2O14529 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC10.04□□□□□ -0.8
CUX2O14529 NMD3P2-201ENST00000421815 761 ntBASIC10.04□□□□□ -0.8
CUX2O14529 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC10.04□□□□□ -0.8
CUX2O14529 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC10.04□□□□□ -0.8
CUX2O14529 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC10.04□□□□□ -0.8
CUX2O14529 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC10.04□□□□□ -0.8
CUX2O14529 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC10.04□□□□□ -0.8
CUX2O14529 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC10.04□□□□□ -0.8
CUX2O14529 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC10.04□□□□□ -0.8
CUX2O14529 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC10.04□□□□□ -0.8
CUX2O14529 AC104687.2-201ENST00000604442 342 ntBASIC10.04□□□□□ -0.8
CUX2O14529 AL353662.3-201ENST00000625131 237 ntBASIC10.04□□□□□ -0.8
CUX2O14529 AC008124.1-201ENST00000609803 9730 ntBASIC10.04□□□□□ -0.8
CUX2O14529 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CUX2O14529 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC10.04□□□□□ -0.8
CUX2O14529 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC10.04□□□□□ -0.8
CUX2O14529 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
CUX2O14529 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CUX2O14529 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
CUX2O14529 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
CUX2O14529 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC10.04□□□□□ -0.8
CUX2O14529 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC10.04□□□□□ -0.8
CUX2O14529 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC10.04□□□□□ -0.8
CUX2O14529 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
CUX2O14529 IARS-213ENST00000627121 4587 ntTSL 5 BASIC10.04□□□□□ -0.8
CUX2O14529 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CUX2O14529 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
CUX2O14529 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC10.04□□□□□ -0.8
CUX2O14529 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
CUX2O14529 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC10.04□□□□□ -0.8
CUX2O14529 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CUX2O14529 AC007842.1-201ENST00000597336 2039 ntBASIC10.04□□□□□ -0.8
CUX2O14529 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CUX2O14529 RNU4-4P-201ENST00000364588 130 ntBASIC10.04□□□□□ -0.8
CUX2O14529 RNA5SP479-201ENST00000364858 117 ntBASIC10.04□□□□□ -0.8
CUX2O14529 MIR433-201ENST00000384837 93 ntBASIC10.04□□□□□ -0.8
CUX2O14529 RNA5SP339-201ENST00000390987 122 ntBASIC10.04□□□□□ -0.8
CUX2O14529 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC10.04□□□□□ -0.8
CUX2O14529 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC10.04□□□□□ -0.8
CUX2O14529 AC008629.2-201ENST00000503783 483 ntBASIC10.04□□□□□ -0.8
CUX2O14529 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC10.04□□□□□ -0.8
CUX2O14529 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CUX2O14529 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC10.04□□□□□ -0.8
CUX2O14529 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC10.04□□□□□ -0.8
CUX2O14529 AC073916.1-201ENST00000545095 130 ntBASIC10.04□□□□□ -0.8
CUX2O14529 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC10.04□□□□□ -0.8
CUX2O14529 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC10.04□□□□□ -0.8
CUX2O14529 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CUX2O14529 AC091193.1-201ENST00000604640 448 ntBASIC10.04□□□□□ -0.8
CUX2O14529 AC012254.5-201ENST00000623573 478 ntBASIC10.04□□□□□ -0.8
CUX2O14529 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC10.04□□□□□ -0.8
CUX2O14529 AC087269.2-201ENST00000641764 975 ntBASIC10.04□□□□□ -0.8
CUX2O14529 EEF1A1P24-201ENST00000451469 1378 ntBASIC10.04□□□□□ -0.8
CUX2O14529 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC10.03□□□□□ -0.8
CUX2O14529 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
CUX2O14529 AC091046.3-201ENST00000631455 1574 ntBASIC10.03□□□□□ -0.8
CUX2O14529 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC10.03□□□□□ -0.8
CUX2O14529 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CUX2O14529 UGT2B27P-201ENST00000505092 1620 ntBASIC10.03□□□□□ -0.8
CUX2O14529 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CUX2O14529 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CUX2O14529 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CUX2O14529 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CUX2O14529 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CUX2O14529 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC10.03□□□□□ -0.8
CUX2O14529 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CUX2O14529 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
CUX2O14529 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CUX2O14529 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC10.03□□□□□ -0.8
CUX2O14529 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
CUX2O14529 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CUX2O14529 AC068138.1-201ENST00000412635 217 ntBASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms