Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RNU6-1251P-201ENST00000364502 107 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 SNORD51.1-201ENST00000365405 77 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM38O00635 RNU1-46P-201ENST00000384425 164 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 RPL5P20-201ENST00000403848 896 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM38O00635 AC073464.3-201ENST00000422564 712 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM38O00635 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM38O00635 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM38O00635 AL117351.1-201ENST00000438864 766 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 RPL5P7-201ENST00000444235 813 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM38O00635 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM38O00635 CYCSP53-201ENST00000455540 265 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 RN7SL165P-201ENST00000477476 291 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 RPL5P14-201ENST00000494197 878 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM38O00635 FABP5P6-201ENST00000510588 409 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM38O00635 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM38O00635 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM38O00635 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM38O00635 RNU6-889P-201ENST00000517189 103 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM38O00635 NPIPB14P-203ENST00000532298 987 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 CR383656.14-201ENST00000551951 406 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM38O00635 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM38O00635 BNIP3P39-201ENST00000601077 554 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 RPSAP75-201ENST00000605848 301 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 AC135803.1-201ENST00000608748 565 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM38O00635 AL512506.1-201ENST00000613918 449 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 AC109809.1-201ENST00000619665 545 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 AC018692.2-201ENST00000624130 348 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 AL138960.2-201ENST00000625145 535 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 AC006927.4-201ENST00000639187 543 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 AL356317.1-201ENST00000396110 1436 ntBASIC6.38□□□□□ -1.39
TRIM38O00635 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM38O00635 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM38O00635 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM38O00635 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM38O00635 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM38O00635 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM38O00635 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM38O00635 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
TRIM38O00635 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM38O00635 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM38O00635 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TRIM38O00635 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM38O00635 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM38O00635 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM38O00635 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TRIM38O00635 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM38O00635 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
TRIM38O00635 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM38O00635 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM38O00635 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TRIM38O00635 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM38O00635 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 RN7SKP275-201ENST00000364626 301 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 LCN1P2-201ENST00000372030 223 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 AL360271.1-201ENST00000395679 510 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM38O00635 RPS17P17-201ENST00000419392 409 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 AL354707.3-201ENST00000427308 331 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 AL590762.3-201ENST00000436372 640 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TRIM38O00635 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM38O00635 MTND2P30-201ENST00000456663 382 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 AC002075.1-201ENST00000457396 676 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 NPM1P27-201ENST00000502784 830 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TRIM38O00635 AC108103.1-201ENST00000511286 446 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM38O00635 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM38O00635 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM38O00635 IGHV1-14-201ENST00000523391 241 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM38O00635 AP003049.1-201ENST00000529418 457 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 OR4R2P-201ENST00000530815 597 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 AC008055.1-201ENST00000547032 609 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM38O00635 AC027176.2-201ENST00000559166 746 ntBASIC6.37□□□□□ -1.39
TRIM38O00635 RN7SL208P-201ENST00000577964 296 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms